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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
QEPSSKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLENDQLRQKVRQLEEE
LRIL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1gd2-a2-m1-cH 64 64 1.0000 1.0000 1.0000 1.62e-39 1gd2-a2-m1-cG_1gd2-a2-m1-cH
2 1gd2-a2-m1-cG 64 64 1.0000 1.0000 1.0000 1.62e-39 1gd2-a2-m1-cG_1gd2-a2-m1-cH
3 1gd2-a3-m1-cI 40 58 0.6094 0.9750 0.6724 2.45e-14 1gd2-a3-m1-cJ_1gd2-a3-m1-cI
4 5t01-a1-m1-cB 62 58 0.2969 0.3065 0.3276 0.37 5t01-a1-m1-cA_5t01-a1-m1-cB
5 5t01-a1-m1-cA 62 58 0.2969 0.3065 0.3276 0.37 5t01-a1-m1-cA_5t01-a1-m1-cB
6 7ung-a1-m1-cB1 392 61 0.3438 0.0561 0.3607 0.84 7ung-a1-m1-cB0_7ung-a1-m1-cB1
7 7rro-a1-m1-cB1 416 61 0.3438 0.0529 0.3607 1.2 7rro-a1-m1-cB0_7rro-a1-m1-cB1
8 1gd2-a3-m1-cJ 11 11 0.1719 1.0000 1.0000 1.9 1gd2-a3-m1-cJ_1gd2-a3-m1-cI
9 8a9a-a1-m1-cB 809 59 0.2500 0.0198 0.2712 2.1 8a9a-a1-m1-cA_8a9a-a1-m1-cB
10 8a9a-a1-m1-cA 809 59 0.2500 0.0198 0.2712 2.1 8a9a-a1-m1-cA_8a9a-a1-m1-cB
11 1m1j-a1-m1-cF 389 38 0.2031 0.0334 0.3421 2.3 1m1j-a1-m1-cF_1m1j-a1-m1-cC
12 1m1j-a1-m1-cC 390 38 0.2031 0.0333 0.3421 2.3 1m1j-a1-m1-cF_1m1j-a1-m1-cC
13 3abh-a1-m1-cB 278 47 0.2969 0.0683 0.4043 4.8 3abh-a1-m1-cA_3abh-a1-m1-cB
14 3abh-a1-m1-cA 278 47 0.2969 0.0683 0.4043 4.8 3abh-a1-m1-cA_3abh-a1-m1-cB
15 5xks-a7-m1-cE 251 31 0.1719 0.0438 0.3548 6.9 5xks-a7-m1-cD_5xks-a7-m1-cE
16 5xks-a7-m1-cD 251 31 0.1719 0.0438 0.3548 6.9 5xks-a7-m1-cD_5xks-a7-m1-cC, 5xks-a7-m1-cD_5xks-a7-m1-cE
17 5xks-a7-m1-cC 252 31 0.1719 0.0437 0.3548 6.9 5xks-a7-m1-cC_5xks-a7-m1-cF, 5xks-a7-m1-cD_5xks-a7-m1-cC
18 5xks-a7-m1-cA 252 31 0.1719 0.0437 0.3548 6.9 5xks-a7-m1-cA_5xks-a7-m1-cF
19 5xks-a7-m1-cF 253 31 0.1719 0.0435 0.3548 6.9 5xks-a7-m1-cA_5xks-a7-m1-cF, 5xks-a7-m1-cC_5xks-a7-m1-cF
20 3bpv-a1-m2-cA 137 37 0.1719 0.0803 0.2973 7.3 3bpv-a1-m1-cA_3bpv-a1-m2-cA
21 3bpv-a1-m1-cA 137 37 0.1719 0.0803 0.2973 7.3 3bpv-a1-m1-cA_3bpv-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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