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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
QEVEETLKRIQSHKGVVGTIVVNNEGIPVKSTLDNTTTVQYAGLMSQLADKARSVVRDLD
PSNDMTFLRVRSKKHEIMVAPDKDFILIVIQNPTD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3l9k-a6-m1-cD 95 95 1.0000 1.0000 1.0000 3.50e-66 3l9k-a6-m1-cC_3l9k-a6-m1-cD
2 3l9k-a6-m1-cC 95 95 1.0000 1.0000 1.0000 3.50e-66 3l9k-a6-m1-cC_3l9k-a6-m1-cD
3 2e8j-a1-m1-cB 96 94 0.7368 0.7292 0.7447 4.51e-48 2e8j-a1-m1-cA_2e8j-a1-m1-cB
4 2e8j-a1-m1-cA 96 94 0.7368 0.7292 0.7447 4.51e-48 2e8j-a1-m1-cA_2e8j-a1-m1-cB
5 7z8f-a1-m1-ct 93 93 0.7368 0.7527 0.7527 8.60e-48 7z8f-a1-m1-cs_7z8f-a1-m1-ct
6 7z8f-a1-m1-cs 93 93 0.7368 0.7527 0.7527 8.60e-48 7z8f-a1-m1-cs_7z8f-a1-m1-ct
7 6f38-a1-m1-cl 93 93 0.7368 0.7527 0.7527 8.60e-48 6f38-a1-m1-ck_6f38-a1-m1-cl
8 6f38-a1-m1-ck 93 93 0.7368 0.7527 0.7527 8.60e-48 6f38-a1-m1-ck_6f38-a1-m1-cl
9 7f8f-a1-m2-cA 80 81 0.3263 0.3875 0.3827 7.05e-16 7f8f-a1-m1-cA_7f8f-a1-m2-cA
10 7f8f-a1-m1-cA 80 81 0.3263 0.3875 0.3827 7.05e-16 7f8f-a1-m1-cA_7f8f-a1-m2-cA
11 1lzw-a2-m2-cB 146 38 0.1263 0.0822 0.3158 0.37 1lzw-a2-m1-cB_1lzw-a2-m2-cB
12 1lzw-a2-m1-cB 146 38 0.1263 0.0822 0.3158 0.37 1lzw-a2-m1-cB_1lzw-a2-m2-cB
13 2aco-a1-m1-cA 168 24 0.0842 0.0476 0.3333 0.38 2aco-a1-m1-cB_2aco-a1-m1-cA
14 2aco-a1-m1-cB 166 24 0.0842 0.0482 0.3333 0.40 2aco-a1-m1-cB_2aco-a1-m1-cA
15 6ukk-a1-m2-cA 158 24 0.0842 0.0506 0.3333 1.2 6ukk-a1-m1-cA_6ukk-a1-m2-cA
16 6ukk-a1-m1-cA 158 24 0.0842 0.0506 0.3333 1.2 6ukk-a1-m1-cA_6ukk-a1-m2-cA
17 6ubo-a1-m1-cB 159 24 0.0842 0.0503 0.3333 1.4 6ubo-a1-m1-cA_6ubo-a1-m1-cB
18 6ubo-a1-m1-cA 159 24 0.0842 0.0503 0.3333 1.4 6ubo-a1-m1-cA_6ubo-a1-m1-cB
19 3icc-a1-m2-cB 248 39 0.1579 0.0605 0.3846 6.2 3icc-a1-m1-cA_3icc-a1-m2-cB, 3icc-a1-m2-cA_3icc-a1-m2-cB
20 3icc-a1-m2-cA 248 39 0.1579 0.0605 0.3846 6.2 3icc-a1-m2-cA_3icc-a1-m2-cB
21 3icc-a1-m1-cA 248 39 0.1579 0.0605 0.3846 6.2 3icc-a1-m1-cA_3icc-a1-m2-cB
22 3ag6-a1-m1-cB 283 57 0.1684 0.0565 0.2807 7.2 3ag6-a1-m1-cA_3ag6-a1-m1-cB
23 3ag6-a1-m1-cA 283 57 0.1684 0.0565 0.2807 7.2 3ag6-a1-m1-cA_3ag6-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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