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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
QGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQH
FADDVIAQRGVRHGHLQCLPKE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3od2-a1-m2-cB 129 82 1.0000 0.6357 1.0000 2.48e-56 3od2-a1-m2-cB_3od2-a1-m1-cA
2 3od2-a1-m1-cA 132 82 1.0000 0.6212 1.0000 3.04e-56 3od2-a1-m2-cB_3od2-a1-m1-cA
3 1q5y-a1-m1-cB 83 82 1.0000 0.9880 1.0000 8.74e-56 1q5y-a1-m1-cD_1q5y-a1-m1-cB
4 1q5y-a1-m1-cC 82 82 1.0000 1.0000 1.0000 1.33e-55 1q5y-a1-m1-cD_1q5y-a1-m1-cC
5 2hzv-a2-m1-cH 129 81 0.9756 0.6202 0.9877 1.22e-52 2hzv-a2-m1-cF_2hzv-a2-m1-cH
6 2hzv-a2-m1-cF 129 81 0.9756 0.6202 0.9877 1.22e-52 2hzv-a2-m1-cF_2hzv-a2-m1-cH
7 2hzv-a1-m1-cB 129 81 0.9756 0.6202 0.9877 1.22e-52 2hzv-a1-m1-cA_2hzv-a1-m1-cB
8 2hzv-a1-m1-cA 129 81 0.9756 0.6202 0.9877 1.22e-52 2hzv-a1-m1-cA_2hzv-a1-m1-cB
9 1q5y-a1-m1-cD 80 82 0.9634 0.9875 0.9634 3.61e-51 1q5y-a1-m1-cD_1q5y-a1-m1-cB, 1q5y-a1-m1-cD_1q5y-a1-m1-cC
10 3bkf-a2-m2-cA 66 81 0.7805 0.9697 0.7901 5.41e-38 3bkf-a2-m1-cA_3bkf-a2-m2-cA
11 3bkf-a2-m1-cA 66 81 0.7805 0.9697 0.7901 5.41e-38 3bkf-a2-m1-cA_3bkf-a2-m2-cA
12 3bkf-a1-m4-cA 66 81 0.7805 0.9697 0.7901 5.41e-38 3bkf-a1-m2-cA_3bkf-a1-m4-cA
13 3bkf-a1-m2-cA 66 81 0.7805 0.9697 0.7901 5.41e-38 3bkf-a1-m2-cA_3bkf-a1-m4-cA
14 2bj8-a1-m2-cB 138 73 0.2927 0.1739 0.3288 1.57e-12 2bj8-a1-m1-cA_2bj8-a1-m2-cB
15 2bj7-a1-m2-cB 138 73 0.2927 0.1739 0.3288 1.57e-12 2bj7-a1-m2-cA_2bj7-a1-m2-cB
16 2bj8-a1-m1-cA 136 73 0.2927 0.1765 0.3288 1.57e-12 2bj8-a1-m1-cA_2bj8-a1-m2-cB
17 2bj7-a1-m2-cA 136 73 0.2927 0.1765 0.3288 1.57e-12 2bj7-a1-m2-cA_2bj7-a1-m2-cB
18 2bj1-a1-m2-cB 132 73 0.2927 0.1818 0.3288 1.63e-12 2bj1-a1-m1-cA_2bj1-a1-m2-cB, 2bj1-a1-m2-cA_2bj1-a1-m2-cB
19 2bj1-a1-m2-cA 132 73 0.2927 0.1818 0.3288 1.63e-12 2bj1-a1-m2-cA_2bj1-a1-m2-cB
20 2bj1-a1-m1-cA 132 73 0.2927 0.1818 0.3288 1.63e-12 2bj1-a1-m1-cA_2bj1-a1-m2-cB
21 2w57-a1-m1-cB 131 48 0.2317 0.1450 0.3958 3.2 2w57-a1-m1-cA_2w57-a1-m1-cB
22 2w57-a1-m1-cA 131 48 0.2317 0.1450 0.3958 3.2 2w57-a1-m1-cA_2w57-a1-m1-cB
23 5zm8-a1-m4-cA 386 40 0.1707 0.0363 0.3500 5.0 5zm8-a1-m1-cA_5zm8-a1-m4-cA, 5zm8-a1-m2-cA_5zm8-a1-m4-cA, 5zm8-a1-m3-cA_5zm8-a1-m4-cA
24 5zm8-a1-m3-cA 386 40 0.1707 0.0363 0.3500 5.0 5zm8-a1-m3-cA_5zm8-a1-m4-cA
25 5zm8-a1-m2-cA 386 40 0.1707 0.0363 0.3500 5.0 5zm8-a1-m2-cA_5zm8-a1-m4-cA
26 5zm8-a1-m1-cA 386 40 0.1707 0.0363 0.3500 5.0 5zm8-a1-m1-cA_5zm8-a1-m4-cA
27 3kb5-a2-m2-cA 193 29 0.1341 0.0570 0.3793 7.5 3kb5-a2-m1-cA_3kb5-a2-m2-cA
28 3kb5-a2-m1-cA 193 29 0.1341 0.0570 0.3793 7.5 3kb5-a2-m1-cA_3kb5-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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