Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
QGRGCLLKEIHLNVTDLDLGYRTKEELIFRYCSGPCHDAETNYDKILNNLTHNKKLDKDT
PSRTCCRPIAFDDDISFLDDSLEYHTLKKHSAKKCACV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7ab8-a1-m2-cB 98 98 1.0000 1.0000 1.0000 4.04e-69 7ab8-a1-m1-cB_7ab8-a1-m2-cB
2 7ab8-a1-m1-cB 98 98 1.0000 1.0000 1.0000 4.04e-69 7ab8-a1-m1-cB_7ab8-a1-m2-cB
3 3fub-a1-m2-cB 92 95 0.6633 0.7065 0.6842 1.02e-34 3fub-a1-m1-cB_3fub-a1-m2-cB
4 3fub-a1-m1-cB 92 95 0.6633 0.7065 0.6842 1.02e-34 3fub-a1-m1-cB_3fub-a1-m2-cB
5 1agq-a1-m1-cB 96 98 0.6633 0.6771 0.6633 1.80e-34 1agq-a1-m1-cA_1agq-a1-m1-cB
6 1agq-a1-m1-cA 91 96 0.6531 0.7033 0.6667 9.89e-33 1agq-a1-m1-cA_1agq-a1-m1-cB
7 6q2n-a1-m1-cB 86 94 0.6429 0.7326 0.6702 2.37e-31 6q2n-a1-m1-cA_6q2n-a1-m1-cB
8 6q2n-a1-m1-cA 86 94 0.6429 0.7326 0.6702 2.37e-31 6q2n-a1-m1-cA_6q2n-a1-m1-cB
9 5nmz-a1-m1-cB 99 98 0.4184 0.4141 0.4184 1.86e-21 5nmz-a1-m1-cB_5nmz-a1-m1-cA
10 5nmz-a1-m1-cA 101 98 0.4184 0.4059 0.4184 2.26e-21 5nmz-a1-m1-cB_5nmz-a1-m1-cA
11 2ask-a3-m3-cB 101 100 0.3571 0.3465 0.3500 1.09e-14 2ask-a3-m3-cA_2ask-a3-m3-cB
12 2ask-a3-m3-cA 101 100 0.3571 0.3465 0.3500 1.09e-14 2ask-a3-m3-cA_2ask-a3-m3-cB
13 2ask-a2-m2-cB 101 100 0.3571 0.3465 0.3500 1.09e-14 2ask-a2-m1-cA_2ask-a2-m2-cB
14 2ask-a2-m1-cA 101 100 0.3571 0.3465 0.3500 1.09e-14 2ask-a2-m1-cA_2ask-a2-m2-cB
15 7n7a-a1-m1-cA 269 63 0.1837 0.0669 0.2857 3.1 7n7a-a1-m1-cA_7n7a-a1-m1-cB
16 7n7a-a1-m1-cB 270 63 0.1837 0.0667 0.2857 3.1 7n7a-a1-m1-cA_7n7a-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600