HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=26)
QIAAIKAIAAIKQQIAAIKEAIAAIK

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	5u59-a1-m2-cA	26	26	0.5769	0.5769	0.5769	0.016	5u59-a1-m1-cA_5u59-a1-m2-cA
2	5u59-a1-m1-cA	26	26	0.5769	0.5769	0.5769	0.016	5u59-a1-m1-cA_5u59-a1-m2-cA
3	7l33-a3-m7-cC	30	26	0.7692	0.6667	0.7692	0.12	7l33-a3-m4-cC_7l33-a3-m7-cC
4	7l33-a3-m4-cC	30	26	0.7692	0.6667	0.7692	0.12	7l33-a3-m4-cC_7l33-a3-m7-cC
5	5u5c-a2-m2-cF	27	20	0.5000	0.4815	0.6500	0.12	5u5c-a2-m2-cE_5u5c-a2-m2-cF
6	5u5c-a2-m2-cE	27	20	0.5000	0.4815	0.6500	0.12	5u5c-a2-m2-cE_5u5c-a2-m2-cF
7	7qdk-a1-m1-cC	29	27	0.5000	0.4483	0.4815	0.14	7qdk-a1-m1-cB_7qdk-a1-m1-cC
8	7qdk-a1-m1-cB	29	27	0.5000	0.4483	0.4815	0.14	7qdk-a1-m1-cB_7qdk-a1-m1-cC
9	4dzn-a1-m1-cB	31	19	0.5000	0.4194	0.6842	0.27	4dzn-a1-m1-cA_4dzn-a1-m1-cB
10	4dzn-a1-m1-cB	31	27	0.6538	0.5484	0.6296	1.6	4dzn-a1-m1-cA_4dzn-a1-m1-cB
11	4dzn-a1-m1-cA	31	19	0.5000	0.4194	0.6842	0.27	4dzn-a1-m1-cA_4dzn-a1-m1-cB
12	4dzn-a1-m1-cA	31	27	0.6538	0.5484	0.6296	1.6	4dzn-a1-m1-cA_4dzn-a1-m1-cB
13	3r4h-a2-m2-cF	28	19	0.5000	0.4643	0.6842	0.34	3r4h-a2-m1-cE_3r4h-a2-m2-cF, 3r4h-a2-m2-cE_3r4h-a2-m2-cF
14	3r4h-a2-m2-cF	28	27	0.6538	0.6071	0.6296	2.3	3r4h-a2-m1-cE_3r4h-a2-m2-cF, 3r4h-a2-m2-cE_3r4h-a2-m2-cF
15	3r4h-a2-m2-cE	26	19	0.5000	0.5000	0.6842	0.36	3r4h-a2-m2-cE_3r4h-a2-m2-cF
16	3r4h-a2-m2-cE	26	26	0.6538	0.6538	0.6538	5.0	3r4h-a2-m2-cE_3r4h-a2-m2-cF
17	3r4h-a2-m1-cE	26	19	0.5000	0.5000	0.6842	0.36	3r4h-a2-m1-cE_3r4h-a2-m2-cF
18	3r4h-a2-m1-cE	26	26	0.6538	0.6538	0.6538	5.0	3r4h-a2-m1-cE_3r4h-a2-m2-cF
19	4dzk-a1-m3-cA	29	19	0.5769	0.5172	0.7895	0.83	4dzk-a1-m2-cA_4dzk-a1-m3-cA
20	4dzk-a1-m3-cA	29	27	0.7308	0.6552	0.7037	1.0	4dzk-a1-m2-cA_4dzk-a1-m3-cA
21	4dzk-a1-m2-cA	29	19	0.5769	0.5172	0.7895	0.83	4dzk-a1-m2-cA_4dzk-a1-m3-cA
22	4dzk-a1-m2-cA	29	27	0.7308	0.6552	0.7037	1.0	4dzk-a1-m2-cA_4dzk-a1-m3-cA
23	7q1q-a1-m1-cB	30	21	0.4615	0.4000	0.5714	1.4	7q1q-a1-m1-cA_7q1q-a1-m1-cB
24	7q1q-a1-m1-cA	30	21	0.4615	0.4000	0.5714	1.4	7q1q-a1-m1-cA_7q1q-a1-m1-cB
25	4dzm-a2-m3-cB	30	19	0.4615	0.4000	0.6316	2.1	4dzm-a2-m1-cB_4dzm-a2-m3-cB
26	4dzm-a2-m1-cB	30	19	0.4615	0.4000	0.6316	2.1	4dzm-a2-m1-cB_4dzm-a2-m3-cB
27	7q1r-a1-m1-cB	30	21	0.4231	0.3667	0.5238	2.6	7q1r-a1-m1-cA_7q1r-a1-m1-cB
28	7q1r-a1-m1-cA	30	21	0.4231	0.3667	0.5238	2.6	7q1r-a1-m1-cA_7q1r-a1-m1-cB
29	6i1j-a2-m6-cA	30	19	0.5385	0.4667	0.7368	4.3	6i1j-a2-m1-cA_6i1j-a2-m6-cA, 6i1j-a2-m2-cA_6i1j-a2-m6-cA
30	6i1j-a2-m6-cA	30	27	0.6923	0.6000	0.6667	5.1	6i1j-a2-m1-cA_6i1j-a2-m6-cA, 6i1j-a2-m2-cA_6i1j-a2-m6-cA
31	6i1j-a2-m2-cA	30	19	0.5385	0.4667	0.7368	4.3	6i1j-a2-m2-cA_6i1j-a2-m6-cA
32	6i1j-a2-m2-cA	30	27	0.6923	0.6000	0.6667	5.1	6i1j-a2-m2-cA_6i1j-a2-m6-cA
33	6i1j-a2-m1-cA	30	19	0.5385	0.4667	0.7368	4.3	6i1j-a2-m1-cA_6i1j-a2-m6-cA
34	6i1j-a2-m1-cA	30	27	0.6923	0.6000	0.6667	5.1	6i1j-a2-m1-cA_6i1j-a2-m6-cA
35	6xxz-a1-m2-cB	30	19	0.4231	0.3667	0.5789	8.6	6xxz-a1-m2-cA_6xxz-a1-m2-cB
36	6xxz-a1-m2-cA	30	19	0.4231	0.3667	0.5789	8.6	6xxz-a1-m2-cA_6xxz-a1-m2-cB

[Back]

Reference:
Jacob Schwartz et al.