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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=28)
QIARLQRQIRALQRQNARLQRQIRALQW

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6owd-a1-m1-cB 28 28 1.0000 1.0000 1.0000 1.10e-10 6owd-a1-m1-cA_6owd-a1-m1-cB
2 6owd-a1-m1-cA 28 28 1.0000 1.0000 1.0000 1.10e-10 6owd-a1-m1-cA_6owd-a1-m1-cB
3 1r05-a1-m1-cB 87 28 0.4643 0.1494 0.4643 0.071 1r05-a1-m1-cA_1r05-a1-m1-cB
4 1r05-a1-m1-cA 87 28 0.4643 0.1494 0.4643 0.071 1r05-a1-m1-cA_1r05-a1-m1-cB
5 5eyo-a2-m2-cC 88 22 0.4286 0.1364 0.5455 0.85 5eyo-a2-m1-cC_5eyo-a2-m2-cC
6 5eyo-a2-m1-cC 88 22 0.4286 0.1364 0.5455 0.85 5eyo-a2-m1-cC_5eyo-a2-m2-cC
7 7tzb-a1-m1-cA 463 22 0.3571 0.0216 0.4545 3.8 7tzb-a1-m1-cB_7tzb-a1-m1-cA
8 7tzb-a1-m1-cB 461 22 0.3571 0.0217 0.4545 3.8 7tzb-a1-m1-cB_7tzb-a1-m1-cA
9 1jun-a1-m1-cB 43 18 0.2857 0.1860 0.4444 6.4 1jun-a1-m1-cA_1jun-a1-m1-cB
10 1jun-a1-m1-cA 43 18 0.2857 0.1860 0.4444 6.4 1jun-a1-m1-cA_1jun-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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