Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=91)
QIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRAL
RYYYDKNIMTKVHGKRYAYKFDFHGIAQALQ

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 5ybc-a1-m1-cC 91 91 1.0000 1.0000 1.0000 1.40e-66 5ybc-a1-m1-cC_5ybc-a1-m1-cA
2 5ybc-a1-m1-cA 92 91 1.0000 0.9891 1.0000 2.05e-66 5ybc-a1-m1-cC_5ybc-a1-m1-cA
3 5e8i-a2-m1-cJ 93 91 0.9780 0.9570 0.9780 1.40e-65 5e8i-a2-m1-cD_5e8i-a2-m1-cJ
4 5e8i-a2-m1-cD 93 91 0.9780 0.9570 0.9780 1.40e-65 5e8i-a2-m1-cD_5e8i-a2-m1-cJ
5 2ypr-a1-m1-cA 96 91 0.8462 0.8021 0.8462 9.61e-58 2ypr-a1-m1-cB_2ypr-a1-m1-cA
6 2ypr-a1-m1-cB 92 91 0.8462 0.8370 0.8462 1.17e-57 2ypr-a1-m1-cB_2ypr-a1-m1-cA
7 2nny-a1-m1-cB 129 80 0.6264 0.4419 0.7125 6.05e-39 2nny-a1-m1-cA_2nny-a1-m1-cB
8 2nny-a1-m1-cA 129 80 0.6264 0.4419 0.7125 6.05e-39 2nny-a1-m1-cA_2nny-a1-m1-cB
9 6dat-a2-m1-cD 135 80 0.6264 0.4222 0.7125 3.45e-38 6dat-a2-m1-cC_6dat-a2-m1-cD
10 6dat-a2-m1-cC 135 80 0.6264 0.4222 0.7125 3.45e-38 6dat-a2-m1-cC_6dat-a2-m1-cD
11 3wu0-a1-m1-cB 136 80 0.6264 0.4191 0.7125 3.97e-38 3wu0-a1-m1-cB_3wu0-a1-m1-cA
12 1gvj-a1-m1-cA 141 80 0.6264 0.4043 0.7125 4.50e-38 1gvj-a1-m1-cA_1gvj-a1-m1-cB
13 3wu0-a1-m1-cA 140 80 0.6264 0.4071 0.7125 4.67e-38 3wu0-a1-m1-cB_3wu0-a1-m1-cA
14 1gvj-a1-m1-cB 146 80 0.6264 0.3904 0.7125 6.07e-38 1gvj-a1-m1-cA_1gvj-a1-m1-cB
15 5ilv-a2-m2-cA 92 80 0.5495 0.5435 0.6250 1.82e-34 5ilv-a2-m1-cA_5ilv-a2-m2-cA
16 5ilv-a2-m1-cA 92 80 0.5495 0.5435 0.6250 1.82e-34 5ilv-a2-m1-cA_5ilv-a2-m2-cA
17 4uuv-a2-m1-cG 95 80 0.5385 0.5158 0.6125 1.54e-33 4uuv-a2-m1-cD_4uuv-a2-m1-cG
18 4uuv-a2-m1-cD 95 80 0.5385 0.5158 0.6125 1.54e-33 4uuv-a2-m1-cD_4uuv-a2-m1-cG
19 1dux-a1-m1-cF 86 81 0.5495 0.5814 0.6173 2.71e-32 1dux-a1-m1-cC_1dux-a1-m1-cF
20 1dux-a1-m1-cC 86 81 0.5495 0.5814 0.6173 2.71e-32 1dux-a1-m1-cC_1dux-a1-m1-cF
21 2pnf-a1-m2-cB 248 54 0.1429 0.0524 0.2407 3.8 2pnf-a1-m1-cB_2pnf-a1-m2-cB, 2pnf-a1-m2-cA_2pnf-a1-m2-cB
22 2pnf-a1-m2-cA 248 54 0.1429 0.0524 0.2407 3.8 2pnf-a1-m2-cA_2pnf-a1-m2-cB
23 2pnf-a1-m1-cB 248 54 0.1429 0.0524 0.2407 3.8 2pnf-a1-m1-cB_2pnf-a1-m2-cB
24 8em7-a1-m1-cB 4378 29 0.1099 0.0023 0.3448 6.0 8em7-a1-m1-cA_8em7-a1-m1-cB
25 8em7-a1-m1-cA 4378 29 0.1099 0.0023 0.3448 6.0 8em7-a1-m1-cA_8em7-a1-m1-cB
26 8em4-a1-m1-cB 3818 29 0.1099 0.0026 0.3448 6.3 8em4-a1-m1-cA_8em4-a1-m1-cB
27 8em4-a1-m1-cA 3818 29 0.1099 0.0026 0.3448 6.3 8em4-a1-m1-cA_8em4-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600