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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
QKERRKIEIKFIENKTRRHVTFSKRKHGIMKKAFELSVLTGTQVLLLVVSETGLVYTFST
PKFEPIVTQQEGRNLIQACLNAPDD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1mnm-a1-m1-cA 85 85 1.0000 1.0000 1.0000 6.01e-59 1mnm-a1-m1-cB_1mnm-a1-m1-cA
2 1mnm-a1-m1-cB 81 81 0.9529 1.0000 1.0000 9.76e-56 1mnm-a1-m1-cB_1mnm-a1-m1-cA
3 1hbx-a1-m1-cB 86 81 0.6471 0.6395 0.6790 8.83e-37 1hbx-a1-m1-cB_1hbx-a1-m1-cA
4 1hbx-a1-m1-cA 87 81 0.6471 0.6322 0.6790 1.10e-36 1hbx-a1-m1-cB_1hbx-a1-m1-cA
5 7nb0-a2-m1-cB 57 43 0.2353 0.3509 0.4651 3.62e-09 7nb0-a2-m1-cD_7nb0-a2-m1-cB
6 7nb0-a2-m1-cD 55 42 0.2353 0.3636 0.4762 5.78e-09 7nb0-a2-m1-cD_7nb0-a2-m1-cB
7 5f28-a3-m2-cD 72 54 0.2118 0.2500 0.3333 1.05e-07 5f28-a3-m2-cC_5f28-a3-m2-cD
8 5f28-a3-m2-cC 72 54 0.2118 0.2500 0.3333 1.05e-07 5f28-a3-m2-cC_5f28-a3-m2-cD
9 3ek1-a2-m1-cG 482 31 0.1176 0.0207 0.3226 4.6 3ek1-a2-m1-cG_3ek1-a2-m1-cH
10 3ek1-a2-m1-cH 483 31 0.1176 0.0207 0.3226 4.6 3ek1-a2-m1-cE_3ek1-a2-m1-cH, 3ek1-a2-m1-cF_3ek1-a2-m1-cH, 3ek1-a2-m1-cG_3ek1-a2-m1-cH
11 3ek1-a2-m1-cF 483 31 0.1176 0.0207 0.3226 4.6 3ek1-a2-m1-cF_3ek1-a2-m1-cH
12 3ek1-a2-m1-cE 483 31 0.1176 0.0207 0.3226 4.6 3ek1-a2-m1-cE_3ek1-a2-m1-cH
13 8ci0-a1-m1-cBBB 666 22 0.1294 0.0165 0.5000 6.4 8ci0-a1-m1-cAAA_8ci0-a1-m1-cBBB
14 8ci0-a1-m1-cAAA 666 22 0.1294 0.0165 0.5000 6.4 8ci0-a1-m1-cAAA_8ci0-a1-m1-cBBB
15 3r4i-a6-m7-cF 311 46 0.1647 0.0450 0.3043 6.8 3r4i-a6-m6-cF_3r4i-a6-m7-cF
16 3r4i-a6-m6-cF 311 46 0.1647 0.0450 0.3043 6.8 3r4i-a6-m6-cF_3r4i-a6-m7-cF

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Reference:
Jacob Schwartz et al.

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