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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
QKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQLLDVKLAL
DMEISAYRKLLEGEE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3tyy-a1-m1-cA 75 75 1.0000 1.0000 1.0000 1.30e-46 3tyy-a1-m1-cB_3tyy-a1-m1-cA
2 3tyy-a1-m1-cB 71 71 0.9467 1.0000 1.0000 3.95e-44 3tyy-a1-m1-cB_3tyy-a1-m1-cA
3 3v4q-a2-m2-cA 74 66 0.6000 0.6081 0.6818 9.68e-26 3v4q-a2-m1-cA_3v4q-a2-m2-cA
4 3v4q-a2-m1-cA 74 66 0.6000 0.6081 0.6818 9.68e-26 3v4q-a2-m1-cA_3v4q-a2-m2-cA
5 2xv5-a1-m1-cB 53 55 0.4667 0.6604 0.6364 1.05e-14 2xv5-a1-m1-cA_2xv5-a1-m1-cB
6 2xv5-a1-m1-cA 53 55 0.4667 0.6604 0.6364 1.05e-14 2xv5-a1-m1-cA_2xv5-a1-m1-cB
7 1gk4-a3-m1-cF 74 73 0.3867 0.3919 0.3973 6.80e-10 1gk4-a3-m1-cE_1gk4-a3-m1-cF
8 1gk4-a3-m1-cE 70 68 0.3733 0.4000 0.4118 1.73e-09 1gk4-a3-m1-cE_1gk4-a3-m1-cF
9 3tnu-a1-m2-cA 90 46 0.2933 0.2444 0.4783 1.83e-07 3tnu-a1-m1-cA_3tnu-a1-m2-cA
10 3tnu-a1-m1-cA 90 46 0.2933 0.2444 0.4783 1.83e-07 3tnu-a1-m1-cA_3tnu-a1-m2-cA
11 1gk6-a1-m1-cA 55 23 0.2400 0.3273 0.7826 6.02e-06 1gk6-a1-m1-cB_1gk6-a1-m1-cA
12 4zry-a1-m2-cA 110 42 0.2667 0.1818 0.4762 6.72e-06 4zry-a1-m1-cA_4zry-a1-m2-cA
13 4zry-a1-m1-cA 110 42 0.2667 0.1818 0.4762 6.72e-06 4zry-a1-m1-cA_4zry-a1-m2-cA
14 1gk6-a1-m1-cB 52 21 0.2133 0.3077 0.7619 9.36e-05 1gk6-a1-m1-cB_1gk6-a1-m1-cA
15 7x5d-a1-m2-cA 99 28 0.1867 0.1414 0.5000 0.061 7x5d-a1-m2-cB_7x5d-a1-m2-cA
16 7x5d-a1-m1-cA 99 28 0.1867 0.1414 0.5000 0.061 7x5d-a1-m2-cB_7x5d-a1-m1-cA
17 7x5d-a1-m2-cB 94 28 0.1867 0.1489 0.5000 0.063 7x5d-a1-m2-cB_7x5d-a1-m1-cA, 7x5d-a1-m2-cB_7x5d-a1-m2-cA
18 4l9a-a3-m1-cA 269 55 0.2133 0.0595 0.2909 1.7 4l9a-a3-m1-cB_4l9a-a3-m1-cA
19 4l9a-a3-m1-cB 260 48 0.2133 0.0615 0.3333 2.9 4l9a-a3-m1-cB_4l9a-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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