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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
QKIVVHLRATGGAPILKQSKFKVSGSDKFANVIDFLRRQLHSDSLFVYVNSAFSPNPDES
VIDLYNNFGFDGKLVVNYACSMAW

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7eu4-a3-m1-cE 94 84 1.0000 0.8936 1.0000 6.23e-59 7eu4-a3-m1-cF_7eu4-a3-m1-cE
2 7eu4-a5-m1-cJ 84 84 1.0000 1.0000 1.0000 9.58e-59 7eu4-a5-m1-cI_7eu4-a5-m1-cJ
3 7eu4-a5-m1-cI 84 84 1.0000 1.0000 1.0000 9.58e-59 7eu4-a5-m1-cI_7eu4-a5-m1-cJ
4 7eu4-a3-m1-cF 85 84 1.0000 0.9882 1.0000 1.09e-58 7eu4-a3-m1-cF_7eu4-a3-m1-cE
5 7eu4-a7-m1-cM 81 81 0.9643 1.0000 1.0000 1.45e-55 7eu4-a7-m1-cN_7eu4-a7-m1-cM
6 7eu4-a7-m1-cN 74 82 0.8810 1.0000 0.9024 6.52e-48 7eu4-a7-m1-cN_7eu4-a7-m1-cM
7 4oki-a2-m1-cB 179 71 0.1905 0.0894 0.2254 1.2 4oki-a2-m1-cB_4oki-a2-m2-cA
8 4oki-a1-m1-cB 179 71 0.1905 0.0894 0.2254 1.2 4oki-a1-m1-cB_4oki-a1-m1-cA
9 4oki-a2-m2-cA 181 71 0.1905 0.0884 0.2254 1.3 4oki-a2-m1-cB_4oki-a2-m2-cA
10 4oki-a1-m1-cA 181 71 0.1905 0.0884 0.2254 1.3 4oki-a1-m1-cB_4oki-a1-m1-cA
11 2es4-a3-m4-cA 316 30 0.1548 0.0411 0.4333 1.5 2es4-a3-m1-cB_2es4-a3-m4-cA
12 2es4-a3-m1-cB 314 30 0.1548 0.0414 0.4333 1.5 2es4-a3-m1-cB_2es4-a3-m4-cA
13 5cx3-a3-m1-cD 117 86 0.2262 0.1624 0.2209 2.0 5cx3-a3-m1-cD_5cx3-a3-m1-cB, 5cx3-a3-m1-cD_5cx3-a3-m1-cC
14 5cx3-a3-m1-cB 118 86 0.2262 0.1610 0.2209 2.2 5cx3-a3-m1-cB_5cx3-a3-m1-cA, 5cx3-a3-m1-cD_5cx3-a3-m1-cB
15 5cx3-a3-m1-cC 119 86 0.2262 0.1597 0.2209 2.4 5cx3-a3-m1-cD_5cx3-a3-m1-cC
16 5cx3-a3-m1-cA 119 86 0.2262 0.1597 0.2209 2.4 5cx3-a3-m1-cB_5cx3-a3-m1-cA
17 3wan-a1-m1-cA 126 86 0.2262 0.1508 0.2209 2.6 3wan-a1-m1-cA_3wan-a1-m1-cB
18 3wan-a1-m1-cB 128 86 0.2262 0.1484 0.2209 2.7 3wan-a1-m1-cA_3wan-a1-m1-cB
19 7pqh-a1-m1-cF 2238 15 0.1190 0.0045 0.6667 6.0 7pqh-a1-m1-cE_7pqh-a1-m1-cF
20 7pqh-a1-m1-cE 2238 15 0.1190 0.0045 0.6667 6.0 7pqh-a1-m1-cE_7pqh-a1-m1-cF
21 6emk-a1-m1-cC 2262 15 0.1190 0.0044 0.6667 6.0 6emk-a1-m1-cA_6emk-a1-m1-cC
22 6emk-a1-m1-cA 2262 15 0.1190 0.0044 0.6667 6.0 6emk-a1-m1-cA_6emk-a1-m1-cC
23 4li1-a2-m2-cA 424 28 0.1310 0.0259 0.3929 9.4 4li1-a2-m2-cA_4li1-a2-m1-cB
24 4li1-a1-m1-cA 424 28 0.1310 0.0259 0.3929 9.4 4li1-a1-m1-cA_4li1-a1-m1-cB
25 4li1-a2-m1-cB 425 28 0.1310 0.0259 0.3929 9.4 4li1-a2-m2-cA_4li1-a2-m1-cB
26 4li1-a1-m1-cB 425 28 0.1310 0.0259 0.3929 9.4 4li1-a1-m1-cA_4li1-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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