HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=85)
QKIVVHLRATGGAPILKQSKFKVSGSDKFANVIDFLRRQLHSDSLFVYVNSAFSPNPDES
VIDLYNNFGFDGKLVVNYACSMAWG

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	7eu4-a3-m1-cE	94	85	1.0000	0.9043	1.0000	9.00e-60	7eu4-a3-m1-cF_7eu4-a3-m1-cE
2	7eu4-a3-m1-cF	85	85	1.0000	1.0000	1.0000	1.59e-59	7eu4-a3-m1-cF_7eu4-a3-m1-cE
3	7eu4-a5-m1-cJ	84	84	0.9882	1.0000	1.0000	1.10e-58	7eu4-a5-m1-cI_7eu4-a5-m1-cJ
4	7eu4-a5-m1-cI	84	84	0.9882	1.0000	1.0000	1.10e-58	7eu4-a5-m1-cI_7eu4-a5-m1-cJ
5	7eu4-a7-m1-cM	81	81	0.9529	1.0000	1.0000	1.81e-55	7eu4-a7-m1-cN_7eu4-a7-m1-cM
6	7eu4-a7-m1-cN	74	82	0.8706	1.0000	0.9024	9.03e-48	7eu4-a7-m1-cN_7eu4-a7-m1-cM
7	5cx3-a3-m1-cD	117	87	0.2353	0.1709	0.2299	0.25	5cx3-a3-m1-cD_5cx3-a3-m1-cB, 5cx3-a3-m1-cD_5cx3-a3-m1-cC
8	5cx3-a3-m1-cB	118	87	0.2353	0.1695	0.2299	0.26	5cx3-a3-m1-cB_5cx3-a3-m1-cA, 5cx3-a3-m1-cD_5cx3-a3-m1-cB
9	5cx3-a3-m1-cC	119	87	0.2353	0.1681	0.2299	0.27	5cx3-a3-m1-cD_5cx3-a3-m1-cC
10	5cx3-a3-m1-cA	119	87	0.2353	0.1681	0.2299	0.27	5cx3-a3-m1-cB_5cx3-a3-m1-cA
11	3wan-a1-m1-cB	128	87	0.2353	0.1562	0.2299	0.31	3wan-a1-m1-cA_3wan-a1-m1-cB
12	4oki-a2-m2-cA	181	71	0.1882	0.0884	0.2254	1.4	4oki-a2-m1-cB_4oki-a2-m2-cA
13	4oki-a1-m1-cA	181	71	0.1882	0.0884	0.2254	1.4	4oki-a1-m1-cB_4oki-a1-m1-cA
14	4oki-a2-m1-cB	179	71	0.1882	0.0894	0.2254	1.5	4oki-a2-m1-cB_4oki-a2-m2-cA
15	4oki-a1-m1-cB	179	71	0.1882	0.0894	0.2254	1.5	4oki-a1-m1-cB_4oki-a1-m1-cA
16	2es4-a3-m4-cA	316	30	0.1529	0.0411	0.4333	1.8	2es4-a3-m1-cB_2es4-a3-m4-cA
17	2es4-a3-m1-cB	314	30	0.1529	0.0414	0.4333	1.8	2es4-a3-m1-cB_2es4-a3-m4-cA
18	3wan-a1-m1-cA	126	86	0.2235	0.1508	0.2209	2.7	3wan-a1-m1-cA_3wan-a1-m1-cB
19	7pqh-a1-m1-cF	2238	15	0.1176	0.0045	0.6667	6.0	7pqh-a1-m1-cE_7pqh-a1-m1-cF
20	7pqh-a1-m1-cE	2238	15	0.1176	0.0045	0.6667	6.0	7pqh-a1-m1-cE_7pqh-a1-m1-cF
21	6emk-a1-m1-cC	2262	15	0.1176	0.0044	0.6667	6.0	6emk-a1-m1-cA_6emk-a1-m1-cC
22	6emk-a1-m1-cA	2262	15	0.1176	0.0044	0.6667	6.0	6emk-a1-m1-cA_6emk-a1-m1-cC
23	4li1-a2-m2-cA	424	28	0.1294	0.0259	0.3929	9.1	4li1-a2-m2-cA_4li1-a2-m1-cB
24	4li1-a1-m1-cA	424	28	0.1294	0.0259	0.3929	9.1	4li1-a1-m1-cA_4li1-a1-m1-cB
25	4li1-a2-m1-cB	425	28	0.1294	0.0259	0.3929	9.1	4li1-a2-m2-cA_4li1-a2-m1-cB
26	4li1-a1-m1-cB	425	28	0.1294	0.0259	0.3929	9.1	4li1-a1-m1-cA_4li1-a1-m1-cB
27	5iv5-a1-m1-cw	1004	39	0.1294	0.0110	0.2821	9.5	5iv5-a1-m1-cZ_5iv5-a1-m1-cw
28	5iv5-a1-m1-cZ	1004	39	0.1294	0.0110	0.2821	9.5	5iv5-a1-m1-cZ_5iv5-a1-m1-cw

[Back]

Reference:
Jacob Schwartz et al.