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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
QKKIEEIAAKYKHSVVKKCCYDGACVNNDETCEQRAARISLGPRCIKAFTECCVVASQLR
ANIS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3hqa-a3-m1-cA 66 64 1.0000 0.9697 1.0000 5.08e-42 3hqa-a3-m1-cB_3hqa-a3-m1-cA
2 3hqa-a3-m1-cB 64 64 1.0000 1.0000 1.0000 7.30e-42 3hqa-a3-m1-cB_3hqa-a3-m1-cA
3 3cu7-a3-m1-cB 1481 64 1.0000 0.0432 1.0000 1.03e-41 3cu7-a3-m1-cB_3cu7-a3-m1-cA
4 3cu7-a3-m1-cA 1625 64 1.0000 0.0394 1.0000 1.33e-41 3cu7-a3-m1-cB_3cu7-a3-m1-cA
5 4p39-a7-m1-cB 69 64 0.9844 0.9130 0.9844 1.42e-40 4p39-a7-m1-cB_4p39-a7-m3-cC
6 4p39-a5-m1-cB 69 64 0.9844 0.9130 0.9844 1.42e-40 4p39-a5-m1-cA_4p39-a5-m1-cB
7 4p39-a5-m1-cA 69 64 0.9844 0.9130 0.9844 1.42e-40 4p39-a5-m1-cA_4p39-a5-m1-cB
8 4p39-a7-m3-cC 69 64 0.9844 0.9130 0.9844 1.81e-40 4p39-a7-m1-cB_4p39-a7-m3-cC
9 4p3a-a6-m1-cD 69 60 0.6250 0.5797 0.6667 7.12e-25 4p3a-a6-m1-cC_4p3a-a6-m1-cD
10 4p3a-a6-m1-cC 68 60 0.6250 0.5882 0.6667 7.41e-25 4p3a-a6-m1-cC_4p3a-a6-m1-cD
11 4hw5-a3-m1-cB 77 61 0.3281 0.2727 0.3443 1.80e-04 4hw5-a3-m1-cA_4hw5-a3-m1-cB
12 4hw5-a3-m1-cA 77 61 0.3281 0.2727 0.3443 1.80e-04 4hw5-a3-m1-cA_4hw5-a3-m1-cB
13 2vyc-a2-m3-cJ 755 37 0.2344 0.0199 0.4054 0.62 2vyc-a2-m1-cG_2vyc-a2-m3-cJ, 2vyc-a2-m3-cI_2vyc-a2-m3-cJ
14 2vyc-a2-m3-cI 755 37 0.2344 0.0199 0.4054 0.62 2vyc-a2-m3-cI_2vyc-a2-m3-cJ
15 2vyc-a2-m1-cG 755 37 0.2344 0.0199 0.4054 0.62 2vyc-a2-m1-cG_2vyc-a2-m3-cJ
16 2pgw-a1-m1-cH 363 17 0.1719 0.0303 0.6471 1.0 2pgw-a1-m1-cD_2pgw-a1-m1-cH, 2pgw-a1-m1-cF_2pgw-a1-m1-cH, 2pgw-a1-m1-cH_2pgw-a1-m1-cC
17 2pgw-a1-m1-cF 363 17 0.1719 0.0303 0.6471 1.0 2pgw-a1-m1-cF_2pgw-a1-m1-cH
18 2pgw-a1-m1-cD 363 17 0.1719 0.0303 0.6471 1.0 2pgw-a1-m1-cD_2pgw-a1-m1-cH
19 2pgw-a1-m1-cC 366 17 0.1719 0.0301 0.6471 1.0 2pgw-a1-m1-cH_2pgw-a1-m1-cC
20 3qwe-a1-m2-cA 260 51 0.2812 0.0692 0.3529 7.2 3qwe-a1-m1-cA_3qwe-a1-m2-cA
21 3qwe-a1-m1-cA 260 51 0.2812 0.0692 0.3529 7.2 3qwe-a1-m1-cA_3qwe-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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