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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
QKRAQIQKREELLSALIDGTSRLENKQFPYPGSTGLDDTYMNSLIQYLQERKQIEDKWRA
SLLKGIQDHVL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4nsm-a1-m3-cA 71 71 1.0000 1.0000 1.0000 7.40e-48 4nsm-a1-m2-cA_4nsm-a1-m3-cA
2 4nsm-a1-m2-cA 71 71 1.0000 1.0000 1.0000 7.40e-48 4nsm-a1-m2-cA_4nsm-a1-m3-cA
3 8if8-a1-m1-cC 598 31 0.1831 0.0217 0.4194 2.0 8if8-a1-m1-cC_8if8-a1-m1-cB
4 8if8-a1-m1-cB 620 31 0.1831 0.0210 0.4194 2.0 8if8-a1-m1-cC_8if8-a1-m1-cB
5 7n4v-a1-m1-cB 953 24 0.1408 0.0105 0.4167 4.0 7n4v-a1-m1-cA_7n4v-a1-m1-cB
6 7n4v-a1-m1-cA 953 24 0.1408 0.0105 0.4167 4.0 7n4v-a1-m1-cA_7n4v-a1-m1-cB
7 5lly-a2-m1-cA 512 48 0.1972 0.0273 0.2917 4.6 5lly-a2-m1-cB_5lly-a2-m1-cA
8 1g3m-a1-m1-cB 285 50 0.2535 0.0632 0.3600 4.9 1g3m-a1-m1-cB_1g3m-a1-m1-cA
9 1g3m-a1-m1-cA 290 50 0.2535 0.0621 0.3600 5.0 1g3m-a1-m1-cB_1g3m-a1-m1-cA
10 3mws-a1-m1-cB 99 37 0.1690 0.1212 0.3243 6.1 3mws-a1-m1-cA_3mws-a1-m1-cB
11 3mws-a1-m1-cA 99 37 0.1690 0.1212 0.3243 6.1 3mws-a1-m1-cA_3mws-a1-m1-cB
12 4h7n-a2-m1-cC 460 22 0.1408 0.0217 0.4545 6.2 4h7n-a2-m1-cC_4h7n-a2-m1-cB
13 4h7n-a2-m1-cB 461 22 0.1408 0.0217 0.4545 6.2 4h7n-a2-m1-cC_4h7n-a2-m1-cB
14 8bmw-a1-m1-cD 121 32 0.1549 0.0909 0.3438 6.4 8bmw-a1-m1-cD_8bmw-a1-m1-cE
15 8bmw-a1-m1-cE 122 32 0.1549 0.0902 0.3438 7.0 8bmw-a1-m1-cD_8bmw-a1-m1-cE
16 3idd-a1-m1-cB 348 72 0.2958 0.0603 0.2917 9.8 3idd-a1-m1-cB_3idd-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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