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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=31)
QLHQQQHQQQHQQHQQHQQQQQLHQHQQQLS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6vps-a1-m1-cI 31 31 1.0000 1.0000 1.0000 1.10e-06 6vps-a1-m1-cC_6vps-a1-m1-cI
2 6vps-a1-m1-cC 31 31 1.0000 1.0000 1.0000 1.10e-06 6vps-a1-m1-cC_6vps-a1-m1-cI
3 6c9a-a1-m1-cB 723 23 0.2258 0.0097 0.3043 0.59 6c9a-a1-m1-cA_6c9a-a1-m1-cB
4 6c9a-a1-m1-cA 723 23 0.2258 0.0097 0.3043 0.59 6c9a-a1-m1-cA_6c9a-a1-m1-cB
5 6pis-a1-m1-cB 239 26 0.3226 0.0418 0.3846 0.79 6pis-a1-m1-cA_6pis-a1-m1-cB
6 6pis-a1-m1-cA 235 26 0.3226 0.0426 0.3846 0.79 6pis-a1-m1-cA_6pis-a1-m1-cB
7 1j0j-a1-m1-cB 588 13 0.2581 0.0136 0.6154 8.8 1j0j-a1-m1-cA_1j0j-a1-m1-cB
8 1j0j-a1-m1-cA 588 13 0.2581 0.0136 0.6154 8.8 1j0j-a1-m1-cA_1j0j-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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