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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
QLLGLLGQAATVIGGEPTVSVEQLDFSAARGDVALQVRAPGFDVLERLRSRLSESGLAVQ
LGSASRDGSTVSARLVIG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6ghu-a1-m1-cB 78 78 1.0000 1.0000 1.0000 6.79e-48 6ghu-a1-m1-cA_6ghu-a1-m1-cB
2 6ghu-a1-m1-cA 78 78 1.0000 1.0000 1.0000 6.79e-48 6ghu-a1-m1-cA_6ghu-a1-m1-cB
3 4dzi-a2-m1-cD 382 63 0.2692 0.0550 0.3333 0.69 4dzi-a2-m1-cB_4dzi-a2-m1-cD
4 4dzi-a2-m1-cB 382 63 0.2692 0.0550 0.3333 0.69 4dzi-a2-m1-cB_4dzi-a2-m1-cD
5 3wd8-a2-m1-cD 391 55 0.2051 0.0409 0.2909 2.9 3wd8-a2-m1-cC_3wd8-a2-m1-cD
6 3wd8-a2-m1-cC 391 55 0.2051 0.0409 0.2909 2.9 3wd8-a2-m1-cC_3wd8-a2-m1-cD
7 4uoz-a1-m1-cC 688 24 0.1410 0.0160 0.4583 3.4 4uoz-a1-m1-cB_4uoz-a1-m1-cC
8 4uoz-a1-m1-cB 688 24 0.1410 0.0160 0.4583 3.4 4uoz-a1-m1-cB_4uoz-a1-m1-cC
9 5xgv-a1-m2-cB 461 35 0.1795 0.0304 0.4000 3.5 5xgv-a1-m1-cA_5xgv-a1-m2-cB
10 5xgv-a1-m1-cA 461 35 0.1795 0.0304 0.4000 3.5 5xgv-a1-m1-cA_5xgv-a1-m2-cB
11 6nrp-a1-m1-cB 238 28 0.1667 0.0546 0.4643 4.4 6nrp-a1-m1-cD_6nrp-a1-m1-cB
12 7caw-a1-m1-cD 230 28 0.1667 0.0565 0.4643 4.5 7caw-a1-m1-cA_7caw-a1-m1-cD
13 7caw-a1-m1-cA 230 28 0.1667 0.0565 0.4643 4.5 7caw-a1-m1-cA_7caw-a1-m1-cD
14 6nrp-a1-m1-cD 231 28 0.1667 0.0563 0.4643 4.5 6nrp-a1-m1-cD_6nrp-a1-m1-cB
15 3zq4-a1-m1-cE 544 73 0.3077 0.0441 0.3288 4.7 3zq4-a1-m1-cD_3zq4-a1-m1-cE, 3zq4-a1-m1-cE_3zq4-a1-m1-cA
16 4uzs-a1-m1-cB 679 24 0.1410 0.0162 0.4583 4.8 4uzs-a1-m1-cB_4uzs-a1-m1-cC
17 4uzs-a1-m1-cC 683 24 0.1410 0.0161 0.4583 4.8 4uzs-a1-m1-cB_4uzs-a1-m1-cC
18 3zq4-a1-m1-cD 538 73 0.3077 0.0446 0.3288 4.8 3zq4-a1-m1-cD_3zq4-a1-m1-cE
19 3zq4-a1-m1-cA 550 73 0.3077 0.0436 0.3288 5.1 3zq4-a1-m1-cE_3zq4-a1-m1-cA
20 4eib-a1-m1-cB 108 23 0.1282 0.0926 0.4348 9.1 4eib-a1-m1-cA_4eib-a1-m1-cB
21 4eib-a1-m1-cA 108 23 0.1282 0.0926 0.4348 9.1 4eib-a1-m1-cA_4eib-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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