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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
QLSTARKFKMITGKDLFQQQKAMDTELKKEDGEITDLMEFVQYGLYLALFQDNIVKAKSD
FSDFRSSFEFDTDGKGLKELVELWQKEI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3d8l-a1-m1-cC 88 88 1.0000 1.0000 1.0000 9.40e-59 3d8l-a1-m1-cC_3d8l-a1-m1-cB
2 3d8l-a1-m1-cB 91 88 1.0000 0.9670 1.0000 9.65e-59 3d8l-a1-m1-cC_3d8l-a1-m1-cB
3 3ogf-a1-m1-cB 81 40 0.1364 0.1481 0.3000 2.0 3ogf-a1-m1-cA_3ogf-a1-m1-cB
4 3ogf-a1-m1-cA 81 40 0.1364 0.1481 0.3000 2.0 3ogf-a1-m1-cA_3ogf-a1-m1-cB
5 7f2p-a1-m9-ch 368 41 0.1364 0.0326 0.2927 3.3 7f2p-a1-m9-ch_7f2p-a1-m51-cg
6 7f2p-a1-m51-cg 370 41 0.1364 0.0324 0.2927 3.4 7f2p-a1-m9-ch_7f2p-a1-m51-cg
7 5hot-a2-m1-cA 209 40 0.1591 0.0670 0.3500 4.4 5hot-a2-m1-cA_5hot-a2-m1-cB
8 5hot-a1-m2-cA 209 40 0.1591 0.0670 0.3500 4.4 5hot-a1-m2-cA_5hot-a1-m1-cB
9 5hot-a1-m1-cA 209 40 0.1591 0.0670 0.3500 4.4 5hot-a1-m1-cA_5hot-a1-m2-cB
10 5hot-a2-m1-cB 213 32 0.1250 0.0516 0.3438 7.4 5hot-a2-m1-cA_5hot-a2-m1-cB
11 5hot-a1-m2-cB 213 32 0.1250 0.0516 0.3438 7.4 5hot-a1-m1-cA_5hot-a1-m2-cB, 5hot-a1-m1-cB_5hot-a1-m2-cB
12 5hot-a1-m1-cB 213 32 0.1250 0.0516 0.3438 7.4 5hot-a1-m1-cB_5hot-a1-m2-cB, 5hot-a1-m2-cA_5hot-a1-m1-cB
13 3oug-a3-m1-cI 105 24 0.1023 0.0857 0.3750 7.5 3oug-a3-m1-cG_3oug-a3-m1-cI
14 3oug-a3-m1-cH 105 24 0.1023 0.0857 0.3750 7.5 3oug-a3-m1-cB_3oug-a3-m1-cH
15 3oug-a3-m1-cG 105 24 0.1023 0.0857 0.3750 7.5 3oug-a3-m1-cG_3oug-a3-m1-cI
16 3oug-a3-m1-cB 105 24 0.1023 0.0857 0.3750 7.5 3oug-a3-m1-cB_3oug-a3-m1-cH
17 5hrp-a1-m2-cA 139 32 0.1250 0.0791 0.3438 8.3 5hrp-a1-m1-cA_5hrp-a1-m2-cA
18 5hrp-a1-m1-cA 139 32 0.1250 0.0791 0.3438 8.3 5hrp-a1-m1-cA_5hrp-a1-m2-cA
19 1p9e-a2-m2-cB 294 74 0.2727 0.0816 0.3243 9.7 1p9e-a2-m1-cB_1p9e-a2-m2-cB, 1p9e-a2-m2-cA_1p9e-a2-m2-cB
20 1p9e-a2-m2-cA 294 74 0.2727 0.0816 0.3243 9.7 1p9e-a2-m2-cA_1p9e-a2-m2-cB
21 1p9e-a2-m1-cB 294 74 0.2727 0.0816 0.3243 9.7 1p9e-a2-m1-cB_1p9e-a2-m2-cB

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Reference:
Jacob Schwartz et al.

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