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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
QLWFHGRISREESQRLIGQQGLVDGLFLVRESPQGFVLSLCHLQKVKHYLILPSEEEGRL
YFSMDDGQTRFTDLLQLVEFHQLNRGILPCLLRHCCT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7mp3-a1-m1-cB 97 97 1.0000 1.0000 1.0000 3.87e-67 7mp3-a1-m1-cB_7mp3-a1-m1-cA
2 4wwq-a1-m1-cB 119 100 1.0000 0.8151 0.9700 7.73e-66 4wwq-a1-m1-cA_4wwq-a1-m1-cB
3 2qms-a2-m2-cD 113 100 1.0000 0.8584 0.9700 1.03e-65 2qms-a2-m1-cB_2qms-a2-m2-cD
4 2qms-a2-m1-cB 113 100 1.0000 0.8584 0.9700 1.03e-65 2qms-a2-m1-cB_2qms-a2-m2-cD
5 4wwq-a1-m1-cA 112 100 1.0000 0.8661 0.9700 1.29e-65 4wwq-a1-m1-cA_4wwq-a1-m1-cB
6 7mp3-a1-m1-cA 102 98 0.9897 0.9412 0.9796 4.14e-64 7mp3-a1-m1-cB_7mp3-a1-m1-cA
7 2aug-a2-m3-cB 108 100 0.6392 0.5741 0.6200 2.94e-43 2aug-a2-m1-cB_2aug-a2-m3-cB
8 2aug-a2-m1-cB 108 100 0.6392 0.5741 0.6200 2.94e-43 2aug-a2-m1-cB_2aug-a2-m3-cB
9 1nrv-a1-m1-cB 100 99 0.6392 0.6200 0.6263 4.22e-40 1nrv-a1-m1-cA_1nrv-a1-m1-cB
10 1nrv-a1-m1-cA 100 99 0.6392 0.6200 0.6263 4.22e-40 1nrv-a1-m1-cA_1nrv-a1-m1-cB
11 1a81-a1-m1-cK 220 94 0.3402 0.1500 0.3511 6.81e-09 1a81-a1-m1-cG_1a81-a1-m1-cK, 1a81-a1-m1-cK_1a81-a1-m1-cI
12 1a81-a1-m1-cK 220 96 0.3711 0.1636 0.3750 2.02e-08 1a81-a1-m1-cG_1a81-a1-m1-cK, 1a81-a1-m1-cK_1a81-a1-m1-cI
13 1a81-a1-m1-cG 220 94 0.3402 0.1500 0.3511 6.81e-09 1a81-a1-m1-cG_1a81-a1-m1-cK
14 1a81-a1-m1-cG 220 96 0.3711 0.1636 0.3750 2.02e-08 1a81-a1-m1-cG_1a81-a1-m1-cK
15 1k9a-a7-m1-cC 438 82 0.3299 0.0731 0.3902 8.33e-09 1k9a-a7-m2-cD_1k9a-a7-m1-cC
16 1a81-a1-m1-cI 254 94 0.3402 0.1299 0.3511 1.11e-08 1a81-a1-m1-cK_1a81-a1-m1-cI
17 1a81-a1-m1-cI 254 96 0.3711 0.1417 0.3750 2.21e-08 1a81-a1-m1-cK_1a81-a1-m1-cI
18 1k9a-a7-m2-cD 433 79 0.3093 0.0693 0.3797 2.08e-07 1k9a-a7-m2-cD_1k9a-a7-m1-cC
19 1opl-a3-m2-cA 451 82 0.3093 0.0665 0.3659 2.77e-07 1opl-a3-m1-cA_1opl-a3-m2-cA
20 1opl-a3-m1-cA 451 82 0.3093 0.0665 0.3659 2.77e-07 1opl-a3-m1-cA_1opl-a3-m2-cA
21 1f1w-a3-m3-cA 104 88 0.3093 0.2885 0.3409 5.19e-06 1f1w-a3-m1-cA_1f1w-a3-m3-cA
22 1f1w-a3-m1-cA 104 88 0.3093 0.2885 0.3409 5.19e-06 1f1w-a3-m1-cA_1f1w-a3-m3-cA
23 1f1w-a2-m2-cA 104 88 0.3093 0.2885 0.3409 5.19e-06 1f1w-a2-m1-cA_1f1w-a2-m2-cA
24 1f1w-a2-m1-cA 104 88 0.3093 0.2885 0.3409 5.19e-06 1f1w-a2-m1-cA_1f1w-a2-m2-cA
25 3s9k-a2-m2-cA 114 100 0.2784 0.2368 0.2700 8.02e-06 3s9k-a2-m1-cA_3s9k-a2-m2-cA
26 3s9k-a2-m1-cA 114 100 0.2784 0.2368 0.2700 8.02e-06 3s9k-a2-m1-cA_3s9k-a2-m2-cA
27 1a1b-a1-m1-cA 105 88 0.3093 0.2857 0.3409 9.47e-06 1a1b-a1-m1-cB_1a1b-a1-m1-cA
28 1a1b-a1-m1-cB 104 88 0.3093 0.2885 0.3409 1.15e-05 1a1b-a1-m1-cB_1a1b-a1-m1-cA
29 3us4-a2-m2-cA 94 53 0.2474 0.2553 0.4528 5.50e-05 3us4-a2-m1-cA_3us4-a2-m2-cA
30 3us4-a2-m1-cA 94 53 0.2474 0.2553 0.4528 5.50e-05 3us4-a2-m1-cA_3us4-a2-m2-cA
31 1bkl-a1-m2-cA 110 88 0.2990 0.2636 0.3295 8.50e-05 1bkl-a1-m1-cA_1bkl-a1-m2-cA
32 1bkl-a1-m1-cA 110 88 0.2990 0.2636 0.3295 8.50e-05 1bkl-a1-m1-cA_1bkl-a1-m2-cA
33 2ci8-a1-m2-cA 98 83 0.2474 0.2449 0.2892 3.91e-04 2ci8-a1-m1-cA_2ci8-a1-m2-cA
34 2ci8-a1-m1-cA 98 83 0.2474 0.2449 0.2892 3.91e-04 2ci8-a1-m1-cA_2ci8-a1-m2-cA
35 1r1s-a5-m1-cA 96 83 0.2165 0.2188 0.2530 0.003 1r1s-a5-m1-cA_1r1s-a5-m1-cE
36 1r1s-a5-m1-cE 99 83 0.2165 0.2121 0.2530 0.003 1r1s-a5-m1-cA_1r1s-a5-m1-cE
37 1bhh-a1-m1-cB 103 106 0.3299 0.3107 0.3019 0.013 1bhh-a1-m1-cB_1bhh-a1-m1-cA
38 1bhh-a1-m1-cA 104 106 0.3299 0.3077 0.3019 0.014 1bhh-a1-m1-cB_1bhh-a1-m1-cA
39 3ps5-a2-m2-cA 529 89 0.2990 0.0548 0.3258 0.016 3ps5-a2-m1-cA_3ps5-a2-m2-cA
40 3ps5-a2-m2-cA 529 45 0.1856 0.0340 0.4000 1.2 3ps5-a2-m1-cA_3ps5-a2-m2-cA
41 3ps5-a2-m1-cA 529 89 0.2990 0.0548 0.3258 0.016 3ps5-a2-m1-cA_3ps5-a2-m2-cA
42 3ps5-a2-m1-cA 529 45 0.1856 0.0340 0.4000 1.2 3ps5-a2-m1-cA_3ps5-a2-m2-cA
43 4u17-a2-m2-cB 102 98 0.2990 0.2843 0.2959 0.027 4u17-a2-m1-cB_4u17-a2-m2-cB
44 4u17-a2-m1-cB 102 98 0.2990 0.2843 0.2959 0.027 4u17-a2-m1-cB_4u17-a2-m2-cB
45 1x27-a1-m1-cF 163 104 0.3299 0.1963 0.3077 0.027 1x27-a1-m1-cA_1x27-a1-m1-cF, 1x27-a1-m1-cD_1x27-a1-m1-cF
46 1x27-a1-m1-cD 163 104 0.3299 0.1963 0.3077 0.027 1x27-a1-m1-cD_1x27-a1-m1-cF
47 1x27-a1-m1-cA 163 104 0.3299 0.1963 0.3077 0.027 1x27-a1-m1-cA_1x27-a1-m1-cF
48 1d1z-a2-m1-cB 94 29 0.1443 0.1489 0.4828 0.052 1d1z-a2-m1-cB_1d1z-a2-m1-cD
49 4u5w-a1-m1-cD 160 101 0.2990 0.1812 0.2871 0.053 4u5w-a1-m1-cD_4u5w-a1-m1-cB
50 1cwe-a1-m1-cC 98 57 0.2062 0.2041 0.3509 0.056 1cwe-a1-m1-cA_1cwe-a1-m1-cC
51 1cwe-a1-m1-cA 98 57 0.2062 0.2041 0.3509 0.056 1cwe-a1-m1-cA_1cwe-a1-m1-cC
52 1d1z-a2-m2-cA 101 29 0.1443 0.1386 0.4828 0.061 1d1z-a2-m1-cD_1d1z-a2-m2-cA
53 1d1z-a2-m1-cD 101 29 0.1443 0.1386 0.4828 0.061 1d1z-a2-m1-cB_1d1z-a2-m1-cD, 1d1z-a2-m1-cD_1d1z-a2-m2-cA
54 1d1z-a1-m1-cD 101 29 0.1443 0.1386 0.4828 0.061 1d1z-a1-m1-cC_1d1z-a1-m1-cD
55 1d1z-a1-m1-cC 101 29 0.1443 0.1386 0.4828 0.061 1d1z-a1-m1-cC_1d1z-a1-m1-cD
56 4u5w-a1-m1-cB 163 103 0.2990 0.1779 0.2816 0.086 4u5w-a1-m1-cD_4u5w-a1-m1-cB
57 1rqq-a1-m1-cD 83 50 0.1959 0.2289 0.3800 0.16 1rqq-a1-m1-cC_1rqq-a1-m1-cD
58 1rqq-a1-m1-cC 83 50 0.1959 0.2289 0.3800 0.16 1rqq-a1-m1-cC_1rqq-a1-m1-cD
59 1rpy-a2-m2-cB 85 50 0.1959 0.2235 0.3800 0.18 1rpy-a2-m1-cB_1rpy-a2-m2-cB
60 1rpy-a2-m1-cB 85 50 0.1959 0.2235 0.3800 0.18 1rpy-a2-m1-cB_1rpy-a2-m2-cB
61 2hck-a1-m1-cB 437 103 0.2990 0.0664 0.2816 0.21 2hck-a1-m1-cA_2hck-a1-m1-cB
62 2hck-a1-m1-cA 437 103 0.2990 0.0664 0.2816 0.21 2hck-a1-m1-cA_2hck-a1-m1-cB
63 4kc5-a2-m1-cC 901 47 0.1649 0.0178 0.3404 1.0 4kc5-a2-m1-cC_4kc5-a2-m1-cD
64 2cxi-a1-m1-cC 339 67 0.1959 0.0560 0.2836 1.1 2cxi-a1-m1-cA_2cxi-a1-m1-cC, 2cxi-a1-m1-cB_2cxi-a1-m1-cC
65 2cxi-a1-m1-cB 339 67 0.1959 0.0560 0.2836 1.1 2cxi-a1-m1-cB_2cxi-a1-m1-cC
66 2cxi-a1-m1-cA 339 67 0.1959 0.0560 0.2836 1.1 2cxi-a1-m1-cA_2cxi-a1-m1-cC
67 1saz-a1-m8-cA 363 40 0.1546 0.0413 0.3750 2.3 1saz-a1-m2-cA_1saz-a1-m8-cA
68 1saz-a1-m2-cA 363 40 0.1546 0.0413 0.3750 2.3 1saz-a1-m2-cA_1saz-a1-m8-cA
69 2e67-a3-m1-cF 263 63 0.2268 0.0837 0.3492 5.1 2e67-a3-m1-cD_2e67-a3-m1-cF
70 2e67-a3-m1-cD 263 63 0.2268 0.0837 0.3492 5.1 2e67-a3-m1-cD_2e67-a3-m1-cF

[Back]
Reference:
Jacob Schwartz et al.

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