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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
QLYCTVVLWDLSRSAATVASLRAYLRDHVPGLRQKTWISSTGPEGEQWGAVYLWDSPEAA
YGRPPGVSKVVELIGYRPTERRYYSVEAAT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4za1-a1-m1-cB 90 90 1.0000 1.0000 1.0000 1.11e-61 4za1-a1-m1-cB_4za1-a1-m1-cC
2 4za1-a1-m1-cC 92 90 0.9889 0.9674 0.9889 3.13e-59 4za1-a1-m1-cB_4za1-a1-m1-cC, 4za1-a1-m1-cC_4za1-a1-m1-cA
3 4za1-a1-m1-cA 99 97 1.0000 0.9091 0.9278 4.78e-59 4za1-a1-m1-cC_4za1-a1-m1-cA
4 4nar-a2-m2-cA 411 42 0.1556 0.0341 0.3333 6.7 4nar-a2-m1-cA_4nar-a2-m2-cA
5 4nar-a2-m1-cA 411 42 0.1556 0.0341 0.3333 6.7 4nar-a2-m1-cA_4nar-a2-m2-cA
6 2dr1-a1-m1-cA 381 23 0.0889 0.0210 0.3478 8.4 2dr1-a1-m1-cB_2dr1-a1-m1-cA
7 2dr1-a1-m1-cB 374 23 0.0889 0.0214 0.3478 8.6 2dr1-a1-m1-cB_2dr1-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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