Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=55)
QNKDPDELRSKVPGEVTASDWEALVGDTRYGYFDETGDWSWKGYFDEQGKWVWNE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4dcz-a1-m1-cB 55 55 1.0000 1.0000 1.0000 2.68e-35 4dcz-a1-m1-cA_4dcz-a1-m1-cB
2 4dcz-a1-m1-cA 55 55 1.0000 1.0000 1.0000 2.68e-35 4dcz-a1-m1-cA_4dcz-a1-m1-cB
3 6scz-a1-m1-cB 371 19 0.1818 0.0270 0.5263 3.9 6scz-a1-m1-cB_6scz-a1-m1-cA
4 6scz-a1-m1-cA 373 19 0.1818 0.0268 0.5263 3.9 6scz-a1-m1-cB_6scz-a1-m1-cA
5 3c1d-a3-m1-cA 143 46 0.2727 0.1049 0.3261 3.9 3c1d-a3-m1-cA_3c1d-a3-m1-cB
6 3mad-a1-m1-cB 450 24 0.1636 0.0200 0.3750 6.0 3mad-a1-m1-cA_3mad-a1-m1-cB
7 3mad-a1-m1-cA 450 24 0.1636 0.0200 0.3750 6.1 3mad-a1-m1-cA_3mad-a1-m1-cB
8 7cup-a1-m1-cF 347 33 0.2545 0.0403 0.4242 7.6 7cup-a1-m1-cF_7cup-a1-m1-cB, 7cup-a1-m1-cF_7cup-a1-m1-cC, 7cup-a1-m1-cF_7cup-a1-m1-cD
9 7cup-a1-m1-cD 348 33 0.2545 0.0402 0.4242 7.7 7cup-a1-m1-cF_7cup-a1-m1-cD
10 7cup-a1-m1-cC 348 33 0.2545 0.0402 0.4242 7.7 7cup-a1-m1-cF_7cup-a1-m1-cC
11 7cup-a1-m1-cB 348 33 0.2545 0.0402 0.4242 7.7 7cup-a1-m1-cF_7cup-a1-m1-cB
12 3ix6-a1-m1-cA 244 26 0.2000 0.0451 0.4231 9.3 3ix6-a1-m1-cA_3ix6-a1-m1-cB
13 3ix6-a1-m1-cB 248 26 0.2000 0.0444 0.4231 9.4 3ix6-a1-m1-cA_3ix6-a1-m1-cB
14 5vt8-a6-m1-cA 208 39 0.3273 0.0865 0.4615 9.4 5vt8-a6-m1-cA_5vt8-a6-m3-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600