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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
QNYLFGCELKDYHFKVDHQLSLRTVSLGLHIVEAEAMNYEGSPIKVTLATLKMSVQPTVS
LGGFEITPPVVLRLKCGPVHISGQHLV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8as5-a1-m1-cA 87 87 1.0000 1.0000 1.0000 1.02e-60 8as5-a1-m1-cA_8as5-a1-m1-cE
2 8as5-a1-m1-cE 97 94 0.9885 0.8866 0.9149 2.29e-52 8as5-a1-m1-cA_8as5-a1-m1-cE
3 1xe0-a2-m1-cJ 104 102 0.8046 0.6731 0.6863 1.26e-40 1xe0-a2-m1-cJ_1xe0-a2-m1-cI
4 1xe0-a2-m1-cI 105 103 0.8046 0.6667 0.6796 1.87e-40 1xe0-a2-m1-cJ_1xe0-a2-m1-cI
5 1k5j-a1-m1-cD 90 97 0.5172 0.5000 0.4639 7.11e-16 1k5j-a1-m1-cC_1k5j-a1-m1-cD
6 1k5j-a1-m1-cC 89 97 0.4943 0.4831 0.4433 7.24e-16 1k5j-a1-m1-cC_1k5j-a1-m1-cD
7 3t30-a2-m1-cI 92 88 0.4023 0.3804 0.3977 3.36e-11 3t30-a2-m1-cI_3t30-a2-m1-cH
8 3t30-a2-m1-cH 93 88 0.3793 0.3548 0.3750 3.73e-10 3t30-a2-m1-cI_3t30-a2-m1-cH
9 3pr6-a2-m2-cA 143 22 0.0920 0.0559 0.3636 8.6 3pr6-a2-m1-cA_3pr6-a2-m2-cA
10 3pr6-a2-m1-cA 143 22 0.0920 0.0559 0.3636 8.6 3pr6-a2-m1-cA_3pr6-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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