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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
QPLNQVITNSTRQFNIELIRVQPRGEQVWIQPLPFSQLVSWIAYLQERQGVSVDAIDIDR
GVVEVKRLQLKR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1uv7-a1-m1-cB 72 72 1.0000 1.0000 1.0000 1.51e-46 1uv7-a1-m1-cB_1uv7-a1-m1-cA
2 1uv7-a1-m1-cA 74 72 1.0000 0.9730 1.0000 1.82e-46 1uv7-a1-m1-cB_1uv7-a1-m1-cA
3 6a0n-a2-m3-cB 320 34 0.1667 0.0375 0.3529 2.2 6a0n-a2-m1-cB_6a0n-a2-m3-cB
4 6a0n-a2-m1-cB 320 34 0.1667 0.0375 0.3529 2.2 6a0n-a2-m1-cB_6a0n-a2-m3-cB
5 2i6d-a2-m2-cA 245 39 0.1944 0.0571 0.3590 3.0 2i6d-a2-m1-cA_2i6d-a2-m2-cA
6 2i6d-a2-m1-cA 245 39 0.1944 0.0571 0.3590 3.0 2i6d-a2-m1-cA_2i6d-a2-m2-cA
7 2re7-a1-m2-cA 130 25 0.1250 0.0692 0.3600 4.8 2re7-a1-m1-cA_2re7-a1-m2-cA
8 2re7-a1-m1-cA 130 25 0.1250 0.0692 0.3600 4.8 2re7-a1-m1-cA_2re7-a1-m2-cA
9 6tv2-a4-m3-cF 372 55 0.2778 0.0538 0.3636 5.9 6tv2-a4-m1-cD_6tv2-a4-m3-cF
10 6tv2-a4-m1-cD 372 55 0.2778 0.0538 0.3636 5.9 6tv2-a4-m1-cD_6tv2-a4-m3-cF
11 5vt8-a6-m1-cA 208 58 0.2500 0.0865 0.3103 6.5 5vt8-a6-m1-cA_5vt8-a6-m3-cC
12 1yox-a2-m1-cD 204 15 0.1250 0.0441 0.6000 7.9 1yox-a2-m1-cE_1yox-a2-m1-cD
13 4ydr-a1-m1-cB 300 12 0.0972 0.0233 0.5833 8.6 4ydr-a1-m1-cB_4ydr-a1-m1-cA
14 1yox-a2-m1-cE 198 15 0.1250 0.0455 0.6000 8.7 1yox-a2-m1-cE_1yox-a2-m1-cD
15 4ydr-a1-m1-cA 304 12 0.0972 0.0230 0.5833 8.7 4ydr-a1-m1-cB_4ydr-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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