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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=42)
QPTSFPLEHNHFGVEDGYIKIYEYNESRNEVKLKKEYADDEL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3kvp-a1-m1-cC 44 42 1.0000 0.9545 1.0000 7.94e-26 3kvp-a1-m1-cE_3kvp-a1-m1-cC
2 3kvp-a1-m1-cE 42 42 1.0000 1.0000 1.0000 8.32e-26 3kvp-a1-m1-cE_3kvp-a1-m1-cC
3 4rz0-a1-m1-cA 114 45 0.2857 0.1053 0.2667 2.6 4rz0-a1-m1-cB_4rz0-a1-m1-cA
4 3mn3-a2-m2-cA 252 36 0.3095 0.0516 0.3611 3.7 3mn3-a2-m1-cA_3mn3-a2-m2-cA
5 3mn3-a2-m1-cA 252 36 0.3095 0.0516 0.3611 3.7 3mn3-a2-m1-cA_3mn3-a2-m2-cA
6 3hyh-a3-m1-cA 238 36 0.3095 0.0546 0.3611 4.3 3hyh-a3-m1-cB_3hyh-a3-m1-cA
7 3hyh-a3-m1-cB 233 36 0.3095 0.0558 0.3611 4.5 3hyh-a3-m1-cB_3hyh-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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