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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
QPVAQPTDIDGTYTGQDDGDRITLVVTGTTGTWTELESDGDQKVKQVTLDSANQRMIIGD
DVKIYTVNGNQIVVDDMDRDPSDQIVLTK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5cyb-a1-m2-cA 89 89 1.0000 1.0000 1.0000 6.19e-58 5cyb-a1-m1-cA_5cyb-a1-m2-cA
2 5cyb-a1-m1-cA 89 89 1.0000 1.0000 1.0000 6.19e-58 5cyb-a1-m1-cA_5cyb-a1-m2-cA
3 3ge2-a1-m2-cA 87 89 0.9663 0.9885 0.9663 6.62e-52 3ge2-a1-m1-cA_3ge2-a1-m2-cA
4 3ge2-a1-m1-cA 87 89 0.9663 0.9885 0.9663 6.62e-52 3ge2-a1-m1-cA_3ge2-a1-m2-cA
5 7m7j-a1-m1-cB 912 70 0.2247 0.0219 0.2857 0.54 7m7j-a1-m1-cB_7m7j-a1-m1-cA
6 7m7g-a1-m1-cB 1379 70 0.2247 0.0145 0.2857 0.70 7m7g-a1-m1-cA_7m7g-a1-m1-cB
7 7m7j-a1-m1-cA 1390 70 0.2247 0.0144 0.2857 0.70 7m7j-a1-m1-cB_7m7j-a1-m1-cA
8 7m7g-a1-m1-cA 1356 47 0.1798 0.0118 0.3404 0.77 7m7g-a1-m1-cA_7m7g-a1-m1-cB
9 6pyt-a1-m1-cR 385 52 0.2135 0.0494 0.3654 5.1 6pyt-a1-m1-cA_6pyt-a1-m1-cR, 6pyt-a1-m1-cF_6pyt-a1-m1-cR, 6pyt-a1-m1-cQ_6pyt-a1-m1-cR
10 6pyt-a1-m1-cQ 385 52 0.2135 0.0494 0.3654 5.1 6pyt-a1-m1-cQ_6pyt-a1-m1-cR
11 6pyt-a1-m1-cF 385 52 0.2135 0.0494 0.3654 5.1 6pyt-a1-m1-cF_6pyt-a1-m1-cR
12 6pyt-a1-m1-cA 385 52 0.2135 0.0494 0.3654 5.1 6pyt-a1-m1-cA_6pyt-a1-m1-cR
13 3j9q-a1-m1-cm 385 52 0.2135 0.0494 0.3654 5.1 3j9q-a1-m1-cF_3j9q-a1-m1-cm
14 3j9q-a1-m1-cF 385 52 0.2135 0.0494 0.3654 5.1 3j9q-a1-m1-cF_3j9q-a1-m1-cm
15 6u5k-a1-m1-cx 383 52 0.2135 0.0496 0.3654 5.4 6u5k-a1-m1-cg_6u5k-a1-m1-cx, 6u5k-a1-m1-cl_6u5k-a1-m1-cx, 6u5k-a1-m1-cm_6u5k-a1-m1-cx, 6u5k-a1-m1-cr_6u5k-a1-m1-cx, 6u5k-a1-m1-cw_6u5k-a1-m1-cx
16 6u5k-a1-m1-cw 383 52 0.2135 0.0496 0.3654 5.4 6u5k-a1-m1-cw_6u5k-a1-m1-cx
17 6u5k-a1-m1-cr 383 52 0.2135 0.0496 0.3654 5.4 6u5k-a1-m1-cr_6u5k-a1-m1-cx
18 6u5k-a1-m1-cm 383 52 0.2135 0.0496 0.3654 5.4 6u5k-a1-m1-cm_6u5k-a1-m1-cx
19 6u5k-a1-m1-cl 383 52 0.2135 0.0496 0.3654 5.4 6u5k-a1-m1-cl_6u5k-a1-m1-cx
20 6u5k-a1-m1-cg 383 52 0.2135 0.0496 0.3654 5.4 6u5k-a1-m1-cg_6u5k-a1-m1-cx

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Reference:
Jacob Schwartz et al.

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