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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
QPVGINTSTTCCYRFINKKIPKQRLESYRRTTSSHCPREAVIFKTKLDKEICADPTQKWV
QDFMKHLDKKTQTPKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ncv-a1-m1-cB 76 76 1.0000 1.0000 1.0000 6.89e-53 1ncv-a1-m1-cA_1ncv-a1-m1-cB
2 1ncv-a1-m1-cA 76 76 1.0000 1.0000 1.0000 6.89e-53 1ncv-a1-m1-cA_1ncv-a1-m1-cB
3 7s5a-a1-m1-cB 76 75 0.5658 0.5658 0.5733 2.79e-27 7s5a-a1-m1-cA_7s5a-a1-m1-cB
4 7s5a-a1-m1-cA 73 73 0.5526 0.5753 0.5753 3.17e-27 7s5a-a1-m1-cA_7s5a-a1-m1-cB
5 1esr-a1-m2-cA 75 74 0.5526 0.5600 0.5676 1.47e-26 1esr-a1-m1-cA_1esr-a1-m2-cA
6 1esr-a1-m1-cA 75 74 0.5526 0.5600 0.5676 1.47e-26 1esr-a1-m1-cA_1esr-a1-m2-cA
7 2ra4-a4-m4-cB 65 65 0.5263 0.6154 0.6154 7.96e-24 2ra4-a4-m2-cB_2ra4-a4-m4-cB
8 2ra4-a4-m2-cB 65 65 0.5263 0.6154 0.6154 7.96e-24 2ra4-a4-m2-cB_2ra4-a4-m4-cB
9 2ra4-a2-m4-cB 65 65 0.5263 0.6154 0.6154 7.96e-24 2ra4-a2-m4-cA_2ra4-a2-m4-cB
10 2ra4-a2-m4-cA 65 65 0.5263 0.6154 0.6154 7.96e-24 2ra4-a2-m4-cA_2ra4-a2-m4-cB
11 5ltl-a1-m1-cA 67 61 0.3026 0.3433 0.3770 1.95e-13 5ltl-a1-m1-cA_5ltl-a1-m1-cB
12 5ltl-a1-m1-cB 68 61 0.3026 0.3382 0.3770 2.14e-13 5ltl-a1-m1-cA_5ltl-a1-m1-cB
13 5yam-a1-m1-cB 69 68 0.3158 0.3478 0.3529 9.57e-13 5yam-a1-m1-cA_5yam-a1-m1-cB
14 5yam-a1-m1-cA 69 68 0.3158 0.3478 0.3529 9.57e-13 5yam-a1-m1-cA_5yam-a1-m1-cB
15 2q8r-a2-m1-cG 63 57 0.2895 0.3492 0.3860 5.09e-12 2q8r-a2-m1-cF_2q8r-a2-m1-cG
16 2q8r-a2-m1-cF 63 57 0.2895 0.3492 0.3860 5.09e-12 2q8r-a2-m1-cF_2q8r-a2-m1-cG
17 2vxw-a1-m1-cB 69 61 0.2632 0.2899 0.3279 2.11e-11 2vxw-a1-m1-cD_2vxw-a1-m1-cB
18 2vxw-a1-m1-cA 69 61 0.2632 0.2899 0.3279 2.11e-11 2vxw-a1-m1-cD_2vxw-a1-m1-cA
19 2vxw-a1-m1-cD 62 61 0.2632 0.3226 0.3279 2.15e-11 2vxw-a1-m1-cD_2vxw-a1-m1-cA, 2vxw-a1-m1-cD_2vxw-a1-m1-cB
20 5l2u-a2-m2-cI 65 61 0.2632 0.3077 0.3279 5.66e-11 5l2u-a2-m2-cG_5l2u-a2-m2-cI
21 5dnf-a1-m1-cG 65 61 0.2632 0.3077 0.3279 5.66e-11 5dnf-a1-m1-cE_5dnf-a1-m1-cG
22 5dnf-a1-m1-cE 65 61 0.2632 0.3077 0.3279 5.66e-11 5dnf-a1-m1-cE_5dnf-a1-m1-cG
23 5dnf-a1-m1-cD 65 61 0.2632 0.3077 0.3279 5.66e-11 5dnf-a1-m1-cA_5dnf-a1-m1-cD
24 5dnf-a1-m1-cA 65 61 0.2632 0.3077 0.3279 5.66e-11 5dnf-a1-m1-cA_5dnf-a1-m1-cD
25 5l2u-a2-m2-cH 64 61 0.2632 0.3125 0.3279 5.71e-11 5l2u-a2-m2-cG_5l2u-a2-m2-cH
26 5l2u-a2-m2-cG 64 61 0.2632 0.3125 0.3279 5.71e-11 5l2u-a2-m2-cG_5l2u-a2-m2-cH, 5l2u-a2-m2-cG_5l2u-a2-m2-cI
27 1hrj-a1-m1-cB 68 61 0.2632 0.2941 0.3279 5.81e-11 1hrj-a1-m1-cA_1hrj-a1-m1-cB
28 1hrj-a1-m1-cA 68 61 0.2632 0.2941 0.3279 5.81e-11 1hrj-a1-m1-cA_1hrj-a1-m1-cB
29 2l9h-a1-m1-cC 67 61 0.2632 0.2985 0.3279 5.93e-11 2l9h-a1-m1-cA_2l9h-a1-m1-cC
30 2l9h-a1-m1-cA 67 61 0.2632 0.2985 0.3279 5.93e-11 2l9h-a1-m1-cA_2l9h-a1-m1-cC
31 5eki-a7-m1-cA 72 62 0.3289 0.3472 0.4032 6.89e-11 5eki-a7-m1-cF_5eki-a7-m1-cA
32 5eki-a7-m1-cF 70 62 0.3289 0.3571 0.4032 7.83e-11 5eki-a7-m1-cF_5eki-a7-m1-cA
33 6aez-a1-m3-cA 64 61 0.2632 0.3125 0.3279 9.65e-11 6aez-a1-m2-cA_6aez-a1-m3-cA
34 6aez-a1-m2-cA 64 61 0.2632 0.3125 0.3279 9.65e-11 6aez-a1-m2-cA_6aez-a1-m3-cA
35 4mhe-a2-m1-cB 69 65 0.3421 0.3768 0.4000 1.14e-10 4mhe-a2-m1-cC_4mhe-a2-m1-cB
36 4mhe-a2-m1-cC 61 57 0.3026 0.3770 0.4035 2.74e-10 4mhe-a2-m1-cC_4mhe-a2-m1-cB
37 1nr4-a5-m4-cG 66 64 0.2895 0.3333 0.3438 1.31e-09 1nr4-a5-m4-cG_1nr4-a5-m3-cE
38 1nr4-a5-m1-cA 67 64 0.2895 0.3284 0.3438 1.44e-09 1nr4-a5-m1-cA_1nr4-a5-m3-cE
39 1nr4-a5-m3-cE 69 64 0.2895 0.3188 0.3438 1.44e-09 1nr4-a5-m1-cA_1nr4-a5-m3-cE, 1nr4-a5-m3-cF_1nr4-a5-m3-cE, 1nr4-a5-m4-cG_1nr4-a5-m3-cE
40 6log-a1-m2-cA 63 61 0.2632 0.3175 0.3279 1.49e-09 6log-a1-m1-cA_6log-a1-m2-cA
41 6log-a1-m1-cA 63 61 0.2632 0.3175 0.3279 1.49e-09 6log-a1-m1-cA_6log-a1-m2-cA
42 1f2l-a1-m1-cD 70 56 0.2763 0.3000 0.3750 3.33e-09 1f2l-a1-m1-cA_1f2l-a1-m1-cD, 1f2l-a1-m1-cC_1f2l-a1-m1-cD
43 1f2l-a1-m1-cC 64 55 0.2763 0.3281 0.3818 4.08e-09 1f2l-a1-m1-cC_1f2l-a1-m1-cD
44 1f2l-a1-m1-cA 64 55 0.2763 0.3281 0.3818 4.08e-09 1f2l-a1-m1-cA_1f2l-a1-m1-cD
45 4oij-a1-m1-cB 71 59 0.3421 0.3662 0.4407 5.16e-09 4oij-a1-m1-cA_4oij-a1-m1-cB
46 4oij-a1-m1-cA 71 59 0.3421 0.3662 0.4407 5.16e-09 4oij-a1-m1-cA_4oij-a1-m1-cB
47 1nr4-a5-m3-cF 66 57 0.2632 0.3030 0.3509 6.36e-08 1nr4-a5-m3-cF_1nr4-a5-m3-cE
48 2fj2-a2-m1-cD 67 57 0.2632 0.2985 0.3509 3.40e-07 2fj2-a2-m1-cD_2fj2-a2-m1-cC
49 2fj2-a2-m1-cC 68 57 0.2632 0.2941 0.3509 3.40e-07 2fj2-a2-m1-cD_2fj2-a2-m1-cC
50 2n54-a1-m1-cB 66 59 0.2500 0.2879 0.3220 1.30e-06 2n54-a1-m1-cA_2n54-a1-m1-cB
51 2n54-a1-m1-cA 66 59 0.2500 0.2879 0.3220 1.30e-06 2n54-a1-m1-cA_2n54-a1-m1-cB
52 2jp1-a1-m1-cB 60 53 0.2500 0.3167 0.3585 5.63e-06 2jp1-a1-m1-cA_2jp1-a1-m1-cB
53 2jp1-a1-m1-cA 60 53 0.2500 0.3167 0.3585 5.63e-06 2jp1-a1-m1-cA_2jp1-a1-m1-cB
54 2hci-a1-m1-cB 65 64 0.2632 0.3077 0.3125 7.78e-06 2hci-a1-m1-cB_2hci-a1-m1-cA
55 2hci-a1-m1-cA 68 64 0.2632 0.2941 0.3125 8.47e-06 2hci-a1-m1-cB_2hci-a1-m1-cA
56 4uai-a1-m1-cA 68 70 0.2105 0.2353 0.2286 0.004 4uai-a1-m1-cB_4uai-a1-m1-cA
57 4uai-a1-m1-cB 67 66 0.1974 0.2239 0.2273 0.004 4uai-a1-m1-cB_4uai-a1-m1-cA
58 3hp3-a3-m1-cF 65 61 0.1579 0.1846 0.1967 0.004 3hp3-a3-m1-cD_3hp3-a3-m1-cF
59 3hp3-a3-m1-cD 64 58 0.1579 0.1875 0.2069 0.011 3hp3-a3-m1-cD_3hp3-a3-m1-cF
60 1qe6-a3-m2-cA 68 38 0.1447 0.1618 0.2895 0.097 1qe6-a3-m2-cA_1qe6-a3-m2-cB
61 1qe6-a3-m1-cD 72 38 0.1447 0.1528 0.2895 0.10 1qe6-a3-m2-cB_1qe6-a3-m1-cD
62 1qe6-a3-m2-cB 71 38 0.1447 0.1549 0.2895 0.11 1qe6-a3-m2-cA_1qe6-a3-m2-cB, 1qe6-a3-m2-cB_1qe6-a3-m1-cD
63 1mi2-a1-m1-cB 73 39 0.1447 0.1507 0.2821 2.3 1mi2-a1-m1-cA_1mi2-a1-m1-cB
64 1mi2-a1-m1-cA 73 39 0.1447 0.1507 0.2821 2.3 1mi2-a1-m1-cA_1mi2-a1-m1-cB
65 3n52-a3-m1-cB 71 39 0.1447 0.1549 0.2821 2.4 3n52-a3-m1-cD_3n52-a3-m1-cB
66 3n52-a3-m1-cD 70 36 0.1447 0.1571 0.3056 2.5 3n52-a3-m1-cC_3n52-a3-m1-cD, 3n52-a3-m1-cD_3n52-a3-m1-cB
67 3n52-a3-m1-cC 67 38 0.1447 0.1642 0.2895 2.5 3n52-a3-m1-cC_3n52-a3-m1-cD
68 1rod-a1-m1-cB 72 36 0.1184 0.1250 0.2500 3.7 1rod-a1-m1-cA_1rod-a1-m1-cB
69 1rod-a1-m1-cA 72 36 0.1184 0.1250 0.2500 3.7 1rod-a1-m1-cA_1rod-a1-m1-cB
70 6ca8-a1-m2-cA 731 69 0.2895 0.0301 0.3188 7.2 6ca8-a1-m1-cA_6ca8-a1-m2-cA
71 6ca8-a1-m1-cA 731 69 0.2895 0.0301 0.3188 7.2 6ca8-a1-m1-cA_6ca8-a1-m2-cA
72 6wzk-a1-m1-cF 64 59 0.1711 0.2031 0.2203 9.9 6wzk-a1-m1-cE_6wzk-a1-m1-cF
73 6wzk-a1-m1-cE 64 59 0.1711 0.2031 0.2203 9.9 6wzk-a1-m1-cE_6wzk-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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