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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=29)
QQARQNLQNLYINRCLREICQELKEIRAL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1yod-a1-m2-cA 29 29 1.0000 1.0000 1.0000 9.15e-14 1yod-a1-m2-cB_1yod-a1-m2-cA
2 1yod-a1-m1-cA 29 29 1.0000 1.0000 1.0000 9.15e-14 1yod-a1-m2-cB_1yod-a1-m1-cA
3 1yod-a1-m2-cB 26 26 0.8966 1.0000 1.0000 8.87e-12 1yod-a1-m2-cB_1yod-a1-m1-cA, 1yod-a1-m2-cB_1yod-a1-m2-cA
4 2kyv-a1-m1-cE 52 13 0.4138 0.2308 0.9231 0.047 2kyv-a1-m1-cD_2kyv-a1-m1-cE
5 2kyv-a1-m1-cD 52 13 0.4138 0.2308 0.9231 0.047 2kyv-a1-m1-cD_2kyv-a1-m1-cE
6 2m3b-a1-m1-cE 51 13 0.4138 0.2353 0.9231 0.049 2m3b-a1-m1-cD_2m3b-a1-m1-cE
7 2m3b-a1-m1-cD 51 13 0.4138 0.2353 0.9231 0.049 2m3b-a1-m1-cD_2m3b-a1-m1-cE
8 2hyn-a1-m1-cE 52 13 0.3793 0.2115 0.8462 0.31 2hyn-a1-m1-cD_2hyn-a1-m1-cE
9 2hyn-a1-m1-cD 52 13 0.3793 0.2115 0.8462 0.31 2hyn-a1-m1-cD_2hyn-a1-m1-cE
10 4kyt-a3-m1-cB 29 15 0.3793 0.3793 0.7333 1.4 4kyt-a3-m1-cC_4kyt-a3-m1-cB

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Reference:
Jacob Schwartz et al.

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