Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
QRFEGVRGVIITTTEGLPISTTIDREKTEKTAALVTSLVGKARSTVKELEEGELKFLTIN
TSKGEVHVAQEEDYILIVLK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7f8f-a1-m2-cA 80 80 1.0000 1.0000 1.0000 3.04e-51 7f8f-a1-m1-cA_7f8f-a1-m2-cA
2 7f8f-a1-m1-cA 80 80 1.0000 1.0000 1.0000 3.04e-51 7f8f-a1-m1-cA_7f8f-a1-m2-cA
3 7z8f-a1-m1-ct 93 81 0.4375 0.3763 0.4321 1.77e-19 7z8f-a1-m1-cs_7z8f-a1-m1-ct
4 7z8f-a1-m1-cs 93 81 0.4375 0.3763 0.4321 1.77e-19 7z8f-a1-m1-cs_7z8f-a1-m1-ct
5 6f38-a1-m1-cl 93 81 0.4375 0.3763 0.4321 1.77e-19 6f38-a1-m1-ck_6f38-a1-m1-cl
6 6f38-a1-m1-ck 93 81 0.4375 0.3763 0.4321 1.77e-19 6f38-a1-m1-ck_6f38-a1-m1-cl
7 2e8j-a1-m1-cB 96 81 0.4375 0.3646 0.4321 1.87e-19 2e8j-a1-m1-cA_2e8j-a1-m1-cB
8 2e8j-a1-m1-cA 96 81 0.4375 0.3646 0.4321 1.87e-19 2e8j-a1-m1-cA_2e8j-a1-m1-cB
9 3l9k-a6-m1-cD 95 81 0.3875 0.3263 0.3827 5.94e-16 3l9k-a6-m1-cC_3l9k-a6-m1-cD
10 3l9k-a6-m1-cC 95 81 0.3875 0.3263 0.3827 5.94e-16 3l9k-a6-m1-cC_3l9k-a6-m1-cD
11 7f8m-a3-m1-cF 116 73 0.2625 0.1810 0.2877 0.006 7f8m-a3-m1-cE_7f8m-a3-m1-cF
12 7f8m-a3-m1-cE 116 73 0.2625 0.1810 0.2877 0.006 7f8m-a3-m1-cE_7f8m-a3-m1-cF
13 7fea-a1-m1-cD 396 59 0.2625 0.0530 0.3559 3.1 7fea-a1-m1-cA_7fea-a1-m1-cD, 7fea-a1-m1-cB_7fea-a1-m1-cD, 7fea-a1-m1-cC_7fea-a1-m1-cD
14 7fea-a1-m1-cC 396 59 0.2625 0.0530 0.3559 3.1 7fea-a1-m1-cC_7fea-a1-m1-cD
15 7fea-a1-m1-cB 396 59 0.2625 0.0530 0.3559 3.1 7fea-a1-m1-cB_7fea-a1-m1-cD
16 7fea-a1-m1-cA 395 59 0.2625 0.0532 0.3559 3.2 7fea-a1-m1-cA_7fea-a1-m1-cD
17 3ux8-a1-m2-cA 564 54 0.2125 0.0301 0.3148 5.6 3ux8-a1-m1-cA_3ux8-a1-m2-cA
18 3ux8-a1-m1-cA 564 54 0.2125 0.0301 0.3148 5.6 3ux8-a1-m1-cA_3ux8-a1-m2-cA
19 4qge-a2-m2-cB 320 22 0.1125 0.0281 0.4091 5.8 4qge-a2-m2-cB_4qge-a2-m1-cA
20 4qge-a1-m1-cB 320 22 0.1125 0.0281 0.4091 5.8 4qge-a1-m1-cB_4qge-a1-m1-cA
21 4qge-a2-m1-cA 322 22 0.1125 0.0280 0.4091 5.8 4qge-a2-m2-cB_4qge-a2-m1-cA
22 4qge-a1-m1-cA 322 22 0.1125 0.0280 0.4091 5.8 4qge-a1-m1-cB_4qge-a1-m1-cA
23 3qi3-a1-m2-cB 325 20 0.1125 0.0277 0.4500 6.6 3qi3-a1-m1-cA_3qi3-a1-m2-cB
24 3qi3-a1-m1-cA 325 20 0.1125 0.0277 0.4500 6.6 3qi3-a1-m1-cA_3qi3-a1-m2-cB
25 3f8u-a3-m2-cC 462 25 0.1500 0.0260 0.4800 7.0 3f8u-a3-m2-cC_3f8u-a3-m1-cA
26 3f8u-a3-m1-cA 469 25 0.1500 0.0256 0.4800 7.5 3f8u-a3-m2-cC_3f8u-a3-m1-cA
27 3dd9-a3-m1-cF 110 48 0.1750 0.1273 0.2917 7.7 3dd9-a3-m1-cF_3dd9-a3-m1-cE
28 3pay-a1-m1-cC 300 27 0.1500 0.0400 0.4444 7.9 3pay-a1-m1-cC_3pay-a1-m1-cD
29 3pay-a1-m1-cD 306 27 0.1500 0.0392 0.4444 8.2 3pay-a1-m1-cB_3pay-a1-m1-cD, 3pay-a1-m1-cC_3pay-a1-m1-cD
30 3pay-a1-m1-cB 302 27 0.1500 0.0397 0.4444 8.7 3pay-a1-m1-cB_3pay-a1-m1-cD
31 3dd9-a3-m1-cE 113 48 0.1750 0.1239 0.2917 8.8 3dd9-a3-m1-cF_3dd9-a3-m1-cE
32 2i5k-a1-m4-cB 466 24 0.1000 0.0172 0.3333 9.4 2i5k-a1-m2-cB_2i5k-a1-m4-cB, 2i5k-a1-m3-cA_2i5k-a1-m4-cB, 2i5k-a1-m4-cA_2i5k-a1-m4-cB
33 2i5k-a1-m2-cB 466 24 0.1000 0.0172 0.3333 9.4 2i5k-a1-m2-cB_2i5k-a1-m4-cB
34 2i5k-a1-m4-cA 465 24 0.1000 0.0172 0.3333 9.8 2i5k-a1-m4-cA_2i5k-a1-m4-cB
35 2i5k-a1-m3-cA 465 24 0.1000 0.0172 0.3333 9.8 2i5k-a1-m3-cA_2i5k-a1-m4-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600