Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
QRREVAKRKIRRLRQGGSVIDYSNAFQIAQDLDWNEPALIDQYHEGLSDHIQEELSHLEV
AKSLSALIGQCIHIERRLARAAAARKPRS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7lga-a2-m1-cD 89 89 1.0000 1.0000 1.0000 9.61e-61 7lga-a2-m1-cE_7lga-a2-m1-cD
2 7lga-a2-m1-cE 84 83 0.9326 0.9881 1.0000 5.66e-56 7lga-a2-m1-cE_7lga-a2-m1-cD
3 5vn6-a1-m1-cA 273 39 0.1461 0.0476 0.3333 0.17 5vn6-a1-m1-cB_5vn6-a1-m1-cA
4 5vn6-a1-m1-cB 268 39 0.1461 0.0485 0.3333 0.18 5vn6-a1-m1-cB_5vn6-a1-m1-cA
5 3pdm-a1-m9-cP 162 29 0.1236 0.0679 0.3793 1.5 3pdm-a1-m8-cP_3pdm-a1-m9-cP
6 3pdm-a1-m8-cP 162 29 0.1236 0.0679 0.3793 1.5 3pdm-a1-m24-cP_3pdm-a1-m8-cP, 3pdm-a1-m8-cP_3pdm-a1-m9-cP
7 3pdm-a1-m24-cP 162 29 0.1236 0.0679 0.3793 1.5 3pdm-a1-m24-cP_3pdm-a1-m8-cP
8 5tro-a1-m1-cA 490 68 0.2247 0.0408 0.2941 7.5 5tro-a1-m1-cA_5tro-a1-m1-cB
9 5tro-a1-m1-cB 491 68 0.2247 0.0407 0.2941 7.7 5tro-a1-m1-cA_5tro-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600