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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
QSINFRTARGNLSEVLNNVEAGEEVEITRRGREPAVIVSKATFEAYKKAALDAEFASLFD
TLDSTNKELVN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3k33-a1-m2-cC 73 71 1.0000 0.9726 1.0000 3.87e-46 3k33-a1-m2-cD_3k33-a1-m2-cC
2 3k33-a1-m2-cD 71 71 1.0000 1.0000 1.0000 4.13e-46 3k33-a1-m2-cD_3k33-a1-m2-cC
3 3hs2-a2-m1-cC 58 57 0.8028 0.9828 1.0000 2.16e-35 3hs2-a2-m1-cB_3hs2-a2-m1-cC
4 3hs2-a2-m1-cB 56 55 0.7746 0.9821 1.0000 3.94e-34 3hs2-a2-m1-cB_3hs2-a2-m1-cC
5 3hs2-a4-m1-cF 55 55 0.7746 1.0000 1.0000 5.23e-34 3hs2-a4-m1-cG_3hs2-a4-m1-cF
6 3hs2-a4-m1-cG 52 51 0.7183 0.9808 1.0000 6.27e-31 3hs2-a4-m1-cG_3hs2-a4-m1-cF
7 3hry-a2-m2-cC 43 48 0.6056 1.0000 0.8958 1.76e-22 3hry-a2-m1-cC_3hry-a2-m2-cC
8 3hry-a2-m1-cC 43 48 0.6056 1.0000 0.8958 1.76e-22 3hry-a2-m1-cC_3hry-a2-m2-cC
9 6jqy-a2-m1-cC 44 36 0.2535 0.4091 0.5000 7.88e-05 6jqy-a2-m1-cD_6jqy-a2-m1-cC
10 6jqy-a2-m1-cD 43 36 0.2535 0.4186 0.5000 8.25e-05 6jqy-a2-m1-cD_6jqy-a2-m1-cC
11 1w4r-a1-m1-cA 174 60 0.2394 0.0977 0.2833 1.4 1w4r-a1-m1-cB_1w4r-a1-m1-cA
12 5zmm-a1-m1-cC 522 18 0.1268 0.0172 0.5000 9.2 5zmm-a1-m1-cD_5zmm-a1-m1-cC, 5zmm-a1-m1-cE_5zmm-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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