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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=43)
QSINFRTSEVLNNVEAGEEVEITRRGREPAVIVSKATFEAYKK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3hry-a2-m2-cC 43 43 1.0000 1.0000 1.0000 5.81e-25 3hry-a2-m1-cC_3hry-a2-m2-cC
2 3hry-a2-m1-cC 43 43 1.0000 1.0000 1.0000 5.81e-25 3hry-a2-m1-cC_3hry-a2-m2-cC
3 3k33-a1-m2-cC 73 48 1.0000 0.5890 0.8958 1.04e-22 3k33-a1-m2-cD_3k33-a1-m2-cC
4 3hs2-a2-m1-cC 58 48 1.0000 0.7414 0.8958 1.05e-22 3hs2-a2-m1-cB_3hs2-a2-m1-cC
5 3k33-a1-m2-cD 71 48 1.0000 0.6056 0.8958 1.07e-22 3k33-a1-m2-cD_3k33-a1-m2-cC
6 3hs2-a4-m1-cG 52 48 1.0000 0.8269 0.8958 1.10e-22 3hs2-a4-m1-cG_3hs2-a4-m1-cF
7 3hs2-a2-m1-cB 56 48 1.0000 0.7679 0.8958 1.31e-22 3hs2-a2-m1-cB_3hs2-a2-m1-cC
8 3hs2-a4-m1-cF 55 48 1.0000 0.7818 0.8958 1.49e-22 3hs2-a4-m1-cG_3hs2-a4-m1-cF
9 6jqy-a2-m1-cD 43 32 0.3488 0.3488 0.4688 0.002 6jqy-a2-m1-cD_6jqy-a2-m1-cC
10 6jqy-a2-m1-cC 44 32 0.3488 0.3409 0.4688 0.002 6jqy-a2-m1-cD_6jqy-a2-m1-cC
11 5zmm-a1-m1-cC 522 18 0.2093 0.0172 0.5000 3.3 5zmm-a1-m1-cD_5zmm-a1-m1-cC, 5zmm-a1-m1-cE_5zmm-a1-m1-cC
12 2xkx-a1-m1-cA 721 19 0.1860 0.0111 0.4211 4.2 2xkx-a1-m1-cB_2xkx-a1-m1-cA
13 2xkx-a1-m1-cB 718 19 0.1860 0.0111 0.4211 4.3 2xkx-a1-m1-cB_2xkx-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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