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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
QSRGEKRTAHNAIEKRYRSSINDKIIELKDLVVGTEAKLNKSAVLRKAIDYIRFLQHSNQ
KLKQENLSLRTAVHKSKSLKDL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1am9-a1-m1-cC 82 82 1.0000 1.0000 1.0000 5.05e-54 1am9-a1-m1-cD_1am9-a1-m1-cC
2 1am9-a1-m1-cD 76 76 0.9268 1.0000 1.0000 5.06e-50 1am9-a1-m1-cD_1am9-a1-m1-cC
3 1ukl-a2-m1-cF 58 60 0.5122 0.7241 0.7000 7.30e-18 1ukl-a2-m1-cE_1ukl-a2-m1-cF
4 1ukl-a2-m1-cE 58 60 0.5122 0.7241 0.7000 7.30e-18 1ukl-a2-m1-cE_1ukl-a2-m1-cF
5 7f2f-a1-m1-cA 90 68 0.3780 0.3444 0.4559 1.37e-11 7f2f-a1-m1-cA_7f2f-a1-m1-cB
6 7f2f-a1-m1-cB 94 67 0.3780 0.3298 0.4627 2.47e-10 7f2f-a1-m1-cA_7f2f-a1-m1-cB
7 7d8t-a1-m1-cB 199 63 0.3049 0.1256 0.3968 6.16e-08 7d8t-a1-m1-cA_7d8t-a1-m1-cB
8 7d8t-a1-m1-cA 199 63 0.3049 0.1256 0.3968 6.16e-08 7d8t-a1-m1-cA_7d8t-a1-m1-cB
9 7d8s-a2-m1-cC 184 55 0.2927 0.1304 0.4364 1.75e-07 7d8s-a2-m1-cD_7d8s-a2-m1-cC
10 1an4-a1-m1-cB 65 61 0.2561 0.3231 0.3443 2.81e-06 1an4-a1-m1-cA_1an4-a1-m1-cB
11 1an4-a1-m1-cA 65 61 0.2561 0.3231 0.3443 2.81e-06 1an4-a1-m1-cA_1an4-a1-m1-cB
12 5eyo-a2-m2-cC 88 63 0.2439 0.2273 0.3175 1.44e-05 5eyo-a2-m1-cC_5eyo-a2-m2-cC
13 5eyo-a2-m1-cC 88 63 0.2439 0.2273 0.3175 1.44e-05 5eyo-a2-m1-cC_5eyo-a2-m2-cC
14 1r05-a1-m1-cB 87 63 0.2439 0.2299 0.3175 4.05e-05 1r05-a1-m1-cA_1r05-a1-m1-cB
15 1r05-a1-m1-cA 87 63 0.2439 0.2299 0.3175 4.05e-05 1r05-a1-m1-cA_1r05-a1-m1-cB
16 7y62-a1-m1-cB 69 44 0.2317 0.2754 0.4318 1.98e-04 7y62-a1-m1-cB_7y62-a1-m1-cA
17 7d8r-a2-m1-cD 174 45 0.2195 0.1034 0.4000 2.07e-04 7d8r-a2-m1-cC_7d8r-a2-m1-cD
18 7eod-a2-m1-cD 69 47 0.2195 0.2609 0.3830 3.15e-04 7eod-a2-m1-cC_7eod-a2-m1-cD
19 7d8s-a2-m1-cD 175 47 0.2317 0.1086 0.4043 4.13e-04 7d8s-a2-m1-cD_7d8s-a2-m1-cC
20 7eod-a2-m1-cC 66 44 0.2195 0.2727 0.4091 0.001 7eod-a2-m1-cC_7eod-a2-m1-cD
21 7f09-a2-m1-cD 65 44 0.2317 0.2923 0.4318 0.001 7f09-a2-m1-cD_7f09-a2-m1-cC
22 7f09-a2-m1-cC 67 44 0.2195 0.2687 0.4091 0.001 7f09-a2-m1-cD_7f09-a2-m1-cC
23 6fx5-a1-m1-cB 74 43 0.2073 0.2297 0.3953 0.003 6fx5-a1-m1-cA_6fx5-a1-m1-cB
24 7y62-a1-m1-cA 74 47 0.2195 0.2432 0.3830 0.004 7y62-a1-m1-cB_7y62-a1-m1-cA
25 7d8r-a2-m1-cC 168 45 0.2195 0.1071 0.4000 0.008 7d8r-a2-m1-cC_7d8r-a2-m1-cD
26 6fx5-a1-m1-cA 72 40 0.1951 0.2222 0.4000 0.010 6fx5-a1-m1-cA_6fx5-a1-m1-cB
27 7ssa-a1-m1-cL 67 56 0.2195 0.2687 0.3214 0.015 7ssa-a1-m1-cK_7ssa-a1-m1-cL
28 7ssa-a1-m1-cK 67 56 0.2195 0.2687 0.3214 0.015 7ssa-a1-m1-cK_7ssa-a1-m1-cL
29 2mh3-a1-m1-cB 70 58 0.1951 0.2286 0.2759 0.24 2mh3-a1-m1-cA_2mh3-a1-m1-cB
30 2mh3-a1-m1-cA 70 58 0.1951 0.2286 0.2759 0.24 2mh3-a1-m1-cA_2mh3-a1-m1-cB
31 4nv1-a2-m1-cF 240 27 0.1341 0.0458 0.4074 1.6 4nv1-a2-m1-cF_4nv1-a2-m1-cE
32 4nv1-a2-m1-cE 242 27 0.1341 0.0455 0.4074 1.6 4nv1-a2-m1-cF_4nv1-a2-m1-cE
33 1v3w-a1-m3-cA 173 52 0.1829 0.0867 0.2885 3.6 1v3w-a1-m2-cA_1v3w-a1-m3-cA
34 1v3w-a1-m2-cA 173 52 0.1829 0.0867 0.2885 3.6 1v3w-a1-m2-cA_1v3w-a1-m3-cA
35 5z42-a1-m2-cA 102 52 0.1829 0.1471 0.2885 4.6 5z42-a1-m1-cA_5z42-a1-m2-cA
36 5z42-a1-m1-cA 102 52 0.1829 0.1471 0.2885 4.6 5z42-a1-m1-cA_5z42-a1-m2-cA
37 3ajx-a2-m1-cD 207 42 0.1707 0.0676 0.3333 5.7 3ajx-a2-m1-cC_3ajx-a2-m1-cD
38 3ajx-a2-m1-cC 207 42 0.1707 0.0676 0.3333 5.7 3ajx-a2-m1-cC_3ajx-a2-m1-cD
39 3u5v-a1-m2-cA 62 62 0.2073 0.2742 0.2742 7.8 3u5v-a1-m1-cA_3u5v-a1-m2-cA
40 3u5v-a1-m1-cA 62 62 0.2073 0.2742 0.2742 7.8 3u5v-a1-m1-cA_3u5v-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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