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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
QSTPDEVNAALDRLLIADALAQLSAEHRAVIQRSYYRGWSTAQIATDLGIAEGTVKSRLH
YAVRALRLTLQELGVTR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3hug-a6-m1-cC 77 77 1.0000 1.0000 1.0000 1.77e-50 3hug-a6-m1-cC_3hug-a6-m1-cA
2 3hug-a6-m1-cA 80 77 1.0000 0.9625 1.0000 2.07e-50 3hug-a6-m1-cC_3hug-a6-m1-cA
3 3hug-a6-m1-cM 74 74 0.9610 1.0000 1.0000 2.55e-48 3hug-a6-m1-cK_3hug-a6-m1-cM
4 3hug-a6-m1-cK 71 71 0.9221 1.0000 1.0000 3.67e-45 3hug-a6-m1-cK_3hug-a6-m1-cM
5 2i33-a1-m1-cB 236 45 0.2208 0.0720 0.3778 0.004 2i33-a1-m1-cB_2i33-a1-m1-cA
6 2i33-a1-m1-cA 238 45 0.2208 0.0714 0.3778 0.005 2i33-a1-m1-cB_2i33-a1-m1-cA
7 8b4h-a1-m1-cD 362 31 0.1688 0.0359 0.4194 0.27 8b4h-a1-m1-cC_8b4h-a1-m1-cD
8 8b4h-a1-m1-cC 362 31 0.1688 0.0359 0.4194 0.27 8b4h-a1-m1-cC_8b4h-a1-m1-cD
9 8b4h-a1-m1-cB 358 31 0.1688 0.0363 0.4194 0.28 8b4h-a1-m1-cA_8b4h-a1-m1-cB
10 8b4h-a1-m1-cA 358 31 0.1688 0.0363 0.4194 0.28 8b4h-a1-m1-cA_8b4h-a1-m1-cB
11 6to4-a1-m1-cD 276 76 0.3117 0.0870 0.3158 2.0 6to4-a1-m1-cD_6to4-a1-m1-cA
12 3klo-a1-m2-cB 216 30 0.1429 0.0509 0.3667 2.1 3klo-a1-m2-cB_3klo-a1-m1-cA
13 3klo-a1-m1-cA 217 30 0.1429 0.0507 0.3667 2.2 3klo-a1-m2-cB_3klo-a1-m1-cA
14 6to4-a1-m1-cA 291 76 0.3117 0.0825 0.3158 2.2 6to4-a1-m1-cD_6to4-a1-m1-cA
15 7bhy-a2-m2-cC 55 31 0.1818 0.2545 0.4516 5.2 7bhy-a2-m1-cC_7bhy-a2-m2-cC
16 7bhy-a2-m1-cC 55 31 0.1818 0.2545 0.4516 5.2 7bhy-a2-m1-cC_7bhy-a2-m2-cC

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Reference:
Jacob Schwartz et al.

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