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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
QSYSPQAFKFFMEQHVENVLKSHQQRLHRKKQLENEMMRVGLSQDAQDQMRKMLCQKESN
YIRLKRAKMDK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5b6b-a2-m1-cE 71 71 1.0000 1.0000 1.0000 1.04e-47 5b6b-a2-m1-cE_5b6b-a2-m1-cL
2 5b6b-a2-m1-cL 72 70 0.9859 0.9722 1.0000 4.00e-47 5b6b-a2-m1-cE_5b6b-a2-m1-cL
3 5xgs-a1-m1-cB 398 30 0.1408 0.0251 0.3333 1.1 5xgs-a1-m1-cA_5xgs-a1-m1-cB
4 5xgs-a1-m1-cA 398 30 0.1408 0.0251 0.3333 1.1 5xgs-a1-m1-cA_5xgs-a1-m1-cB
5 4aw2-a1-m2-cA 398 44 0.1127 0.0201 0.1818 1.5 4aw2-a1-m1-cA_4aw2-a1-m2-cA
6 4aw2-a1-m1-cA 398 44 0.1127 0.0201 0.1818 1.5 4aw2-a1-m1-cA_4aw2-a1-m2-cA
7 5i6g-a1-m1-cB 1030 28 0.1408 0.0097 0.3571 1.6 5i6g-a1-m1-cA_5i6g-a1-m1-cB
8 5i6g-a1-m1-cA 1028 28 0.1408 0.0097 0.3571 1.6 5i6g-a1-m1-cA_5i6g-a1-m1-cB
9 1jzo-a1-m1-cA 215 22 0.1268 0.0419 0.4091 5.4 1jzo-a1-m1-cA_1jzo-a1-m1-cB
10 1tjd-a1-m2-cA 216 22 0.1268 0.0417 0.4091 5.5 1tjd-a1-m1-cA_1tjd-a1-m2-cA
11 1tjd-a1-m1-cA 216 22 0.1268 0.0417 0.4091 5.5 1tjd-a1-m1-cA_1tjd-a1-m2-cA
12 1jzo-a1-m1-cB 216 22 0.1268 0.0417 0.4091 6.0 1jzo-a1-m1-cA_1jzo-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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