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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
QTFEGAGVVFEVQVEKNLVDIDHRLYRLPNSTVRNGPSLFQVKPGSVVSYSGTVSQPWST
ITDIYIHKQSEQELA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3tdq-a1-m1-cB 75 75 1.0000 1.0000 1.0000 1.67e-51 3tdq-a1-m1-cB_3tdq-a1-m1-cA
2 3tdq-a1-m1-cA 83 75 1.0000 0.9036 1.0000 2.00e-51 3tdq-a1-m1-cB_3tdq-a1-m1-cA
3 7dl2-a1-m1-cA 1127 49 0.2400 0.0160 0.3673 0.36 7dl2-a1-m1-cB_7dl2-a1-m1-cA
4 3upl-a1-m1-cB 437 37 0.1333 0.0229 0.2703 0.94 3upl-a1-m1-cA_3upl-a1-m1-cB
5 3upl-a1-m1-cA 437 37 0.1333 0.0229 0.2703 0.97 3upl-a1-m1-cA_3upl-a1-m1-cB
6 5ean-a1-m2-cA 1051 27 0.1600 0.0114 0.4444 4.0 5ean-a1-m1-cA_5ean-a1-m2-cA
7 5ean-a1-m1-cA 1051 27 0.1600 0.0114 0.4444 4.0 5ean-a1-m1-cA_5ean-a1-m2-cA
8 2boc-a1-m4-cB 212 33 0.1867 0.0660 0.4242 6.7 2boc-a1-m3-cB_2boc-a1-m4-cB
9 2boc-a1-m3-cB 212 33 0.1867 0.0660 0.4242 6.7 2boc-a1-m3-cB_2boc-a1-m4-cB
10 3ij6-a2-m1-cD 302 29 0.1333 0.0331 0.3448 6.9 3ij6-a2-m1-cC_3ij6-a2-m1-cD
11 3ij6-a2-m1-cC 302 29 0.1333 0.0331 0.3448 6.9 3ij6-a2-m1-cC_3ij6-a2-m1-cD
12 3kv5-a3-m2-cD 445 39 0.2267 0.0382 0.4359 6.9 3kv5-a3-m2-cD_3kv5-a3-m1-cA
13 3kv5-a3-m1-cA 447 39 0.2267 0.0380 0.4359 7.0 3kv5-a3-m2-cD_3kv5-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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