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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
QTLLFVGVVDPSQPDRSDIRPFTEKWTQIWQSQLYNNHVDLQVFVIDDNRAIFFKNGEQA
FEAKKFLLKQEFVSEVTIEGQSFDG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ofg-a1-m1-cA 89 85 1.0000 0.9551 1.0000 1.33e-58 3ofg-a1-m1-cB_3ofg-a1-m1-cA
2 3ofg-a1-m1-cB 85 85 1.0000 1.0000 1.0000 1.86e-58 3ofg-a1-m1-cB_3ofg-a1-m1-cA
3 3ofh-a3-m1-cA 86 64 0.3294 0.3256 0.4375 1.11e-13 3ofh-a3-m1-cB_3ofh-a3-m1-cA
4 3ofh-a3-m1-cB 79 62 0.3176 0.3418 0.4355 5.95e-13 3ofh-a3-m1-cB_3ofh-a3-m1-cA
5 4rp3-a1-m1-cA 91 51 0.1765 0.1648 0.2941 0.97 4rp3-a1-m1-cB_4rp3-a1-m1-cA
6 4rp3-a1-m1-cB 90 51 0.1765 0.1667 0.2941 0.99 4rp3-a1-m1-cB_4rp3-a1-m1-cA
7 3gp4-a2-m3-cA 132 71 0.1765 0.1136 0.2113 1.5 3gp4-a2-m3-cB_3gp4-a2-m3-cA
8 3gp4-a2-m3-cB 130 71 0.1765 0.1154 0.2113 1.5 3gp4-a2-m2-cB_3gp4-a2-m3-cB, 3gp4-a2-m3-cB_3gp4-a2-m3-cA
9 3gp4-a2-m2-cB 130 71 0.1765 0.1154 0.2113 1.5 3gp4-a2-m2-cB_3gp4-a2-m3-cB
10 5l84-a1-m2-cA 269 46 0.2000 0.0632 0.3696 1.6 5l84-a1-m1-cA_5l84-a1-m2-cA
11 5l84-a1-m1-cA 269 46 0.2000 0.0632 0.3696 1.6 5l84-a1-m1-cA_5l84-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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