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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=56)
QVCCGARDEYWKCLDENLEDASQCKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6pcf-a1-m2-cB 65 56 1.0000 0.8615 1.0000 3.38e-36 6pcf-a1-m2-cC_6pcf-a1-m2-cB
2 6pcf-a1-m1-cD 64 56 1.0000 0.8750 1.0000 3.96e-36 6pcf-a1-m2-cC_6pcf-a1-m1-cD
3 6pcf-a1-m2-cC 56 56 1.0000 1.0000 1.0000 6.58e-36 6pcf-a1-m2-cC_6pcf-a1-m1-cD, 6pcf-a1-m2-cC_6pcf-a1-m2-cB
4 6pce-a1-m1-cB 70 56 0.9821 0.7857 0.9821 1.09e-34 6pce-a1-m1-cA_6pce-a1-m1-cB
5 6pce-a1-m1-cA 60 56 0.9821 0.9167 0.9821 1.37e-34 6pce-a1-m1-cA_6pce-a1-m1-cB
6 8h8r-a1-m1-cU 75 45 0.2500 0.1867 0.3111 0.086 8h8r-a1-m1-cH_8h8r-a1-m1-cU
7 8h8r-a1-m1-cH 75 45 0.2500 0.1867 0.3111 0.086 8h8r-a1-m1-cH_8h8r-a1-m1-cU
8 5fr9-a3-m1-cA 319 18 0.1786 0.0313 0.5556 0.17 5fr9-a3-m1-cA_5fr9-a3-m1-cH
9 5fr9-a3-m1-cB 320 18 0.1786 0.0312 0.5556 0.17 5fr9-a3-m1-cB_5fr9-a3-m1-cH
10 5fr9-a3-m1-cH 321 18 0.1786 0.0312 0.5556 0.17 5fr9-a3-m1-cA_5fr9-a3-m1-cH, 5fr9-a3-m1-cB_5fr9-a3-m1-cH
11 6dww-a1-m2-cA 483 30 0.1964 0.0228 0.3667 2.6 6dww-a1-m1-cA_6dww-a1-m2-cA
12 6dww-a1-m1-cA 483 30 0.1964 0.0228 0.3667 2.6 6dww-a1-m1-cA_6dww-a1-m2-cA
13 4d1q-a1-m2-cG 499 30 0.1964 0.0220 0.3667 2.6 4d1q-a1-m2-cG_4d1q-a1-m2-cB
14 4d1q-a1-m2-cH 509 30 0.1964 0.0216 0.3667 2.7 4d1q-a1-m1-cH_4d1q-a1-m2-cH
15 4d1q-a1-m1-cH 509 30 0.1964 0.0216 0.3667 2.7 4d1q-a1-m1-cH_4d1q-a1-m2-cH
16 4d1q-a1-m2-cB 505 30 0.1964 0.0218 0.3667 2.7 4d1q-a1-m2-cG_4d1q-a1-m2-cB
17 6f90-a1-m2-cA 714 47 0.2143 0.0168 0.2553 3.0 6f90-a1-m1-cA_6f90-a1-m2-cA
18 6f90-a1-m1-cA 714 47 0.2143 0.0168 0.2553 3.0 6f90-a1-m1-cA_6f90-a1-m2-cA
19 3fnb-a1-m1-cB 361 41 0.1786 0.0277 0.2439 3.4 3fnb-a1-m1-cB_3fnb-a1-m1-cA
20 3fnb-a1-m1-cA 364 41 0.1786 0.0275 0.2439 3.5 3fnb-a1-m1-cB_3fnb-a1-m1-cA
21 7ebe-a2-m1-cH 533 29 0.1429 0.0150 0.2759 3.9 7ebe-a2-m1-cH_7ebe-a2-m1-cG
22 7ebe-a1-m1-cA 544 29 0.1429 0.0147 0.2759 4.1 7ebe-a1-m1-cD_7ebe-a1-m1-cA
23 3wwj-a6-m1-cL 317 23 0.1964 0.0347 0.4783 4.2 3wwj-a6-m1-cL_3wwj-a6-m1-cJ
24 3wwj-a6-m1-cJ 318 23 0.1964 0.0346 0.4783 4.2 3wwj-a6-m1-cL_3wwj-a6-m1-cJ
25 7ebe-a2-m1-cG 535 29 0.1429 0.0150 0.2759 4.2 7ebe-a2-m1-cG_7ebe-a2-m1-cE, 7ebe-a2-m1-cH_7ebe-a2-m1-cG
26 7ebe-a1-m1-cD 541 29 0.1429 0.0148 0.2759 4.2 7ebe-a1-m1-cD_7ebe-a1-m1-cA
27 7ebe-a2-m1-cE 542 29 0.1429 0.0148 0.2759 4.2 7ebe-a2-m1-cG_7ebe-a2-m1-cE
28 3zdq-a1-m2-cA 570 22 0.1786 0.0175 0.4545 7.7 3zdq-a1-m1-cA_3zdq-a1-m2-cA
29 3zdq-a1-m1-cA 570 22 0.1786 0.0175 0.4545 7.7 3zdq-a1-m1-cA_3zdq-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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