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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
QVDADLQAEIVGKYNADLQKAVQIEEKKASEIATEAVKEHVTAEYEERYAEHEEHDRIRD
VAEILEQEHAEVRRLI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3h36-a2-m3-cA 76 76 1.0000 1.0000 1.0000 6.11e-47 3h36-a2-m1-cA_3h36-a2-m3-cA
2 3h36-a2-m1-cA 76 76 1.0000 1.0000 1.0000 6.11e-47 3h36-a2-m1-cA_3h36-a2-m3-cA
3 3h36-a1-m2-cA 76 76 1.0000 1.0000 1.0000 6.11e-47 3h36-a1-m1-cA_3h36-a1-m2-cA
4 3h36-a1-m1-cA 76 76 1.0000 1.0000 1.0000 6.11e-47 3h36-a1-m1-cA_3h36-a1-m2-cA
5 7zk3-a1-m1-cB 721 23 0.1711 0.0180 0.5652 0.46 7zk3-a1-m1-cA_7zk3-a1-m1-cB
6 7zk3-a1-m1-cA 721 23 0.1711 0.0180 0.5652 0.46 7zk3-a1-m1-cA_7zk3-a1-m1-cB
7 3dfz-a1-m1-cB 199 35 0.1184 0.0452 0.2571 2.0 3dfz-a1-m1-cA_3dfz-a1-m1-cB
8 3dfz-a1-m1-cA 196 35 0.1184 0.0459 0.2571 2.2 3dfz-a1-m1-cA_3dfz-a1-m1-cB
9 3tm3-a1-m2-cA 144 38 0.1842 0.0972 0.3684 3.0 3tm3-a1-m1-cA_3tm3-a1-m2-cA
10 3tm3-a1-m1-cA 144 38 0.1842 0.0972 0.3684 3.0 3tm3-a1-m1-cA_3tm3-a1-m2-cA
11 7b5e-a1-m1-cB 718 17 0.1447 0.0153 0.6471 5.8 7b5e-a1-m1-cA_7b5e-a1-m1-cB
12 7b5e-a1-m1-cA 718 17 0.1447 0.0153 0.6471 5.8 7b5e-a1-m1-cA_7b5e-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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