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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=30)
QVNNLGFIASILFVLVPTVFLLILFIQTGK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7rcv-a1-m1-cm 30 30 1.0000 1.0000 1.0000 7.70e-14 7rcv-a1-m1-cM_7rcv-a1-m1-cm
2 7rcv-a1-m1-cM 30 30 1.0000 1.0000 1.0000 7.70e-14 7rcv-a1-m1-cM_7rcv-a1-m1-cm
3 8eqm-a1-m1-cm 31 30 0.7000 0.6774 0.7000 2.05e-09 8eqm-a1-m1-cM_8eqm-a1-m1-cm
4 8eqm-a1-m1-cM 31 30 0.7000 0.6774 0.7000 2.05e-09 8eqm-a1-m1-cM_8eqm-a1-m1-cm
5 7rf2-a1-m1-cM 32 28 0.6333 0.5938 0.6786 1.23e-07 7rf2-a1-m1-cm_7rf2-a1-m1-cM
6 7rf2-a1-m1-cm 31 28 0.6333 0.6129 0.6786 1.33e-07 7rf2-a1-m1-cm_7rf2-a1-m1-cM
7 5xnm-a1-m1-cm 33 28 0.5667 0.5152 0.6071 3.03e-06 5xnm-a1-m1-cM_5xnm-a1-m1-cm
8 5xnm-a1-m1-cM 33 28 0.5667 0.5152 0.6071 3.03e-06 5xnm-a1-m1-cM_5xnm-a1-m1-cm
9 7pin-a1-m1-cm 31 28 0.5000 0.4839 0.5357 9.88e-05 7pin-a1-m1-cM_7pin-a1-m1-cm
10 7pin-a1-m1-cM 31 28 0.5000 0.4839 0.5357 9.88e-05 7pin-a1-m1-cM_7pin-a1-m1-cm
11 6kaf-a1-m1-cm 32 30 0.4667 0.4375 0.4667 1.39e-04 6kaf-a1-m1-cM_6kaf-a1-m1-cm
12 6kaf-a1-m1-cM 32 30 0.4667 0.4375 0.4667 1.39e-04 6kaf-a1-m1-cM_6kaf-a1-m1-cm
13 7y7a-a1-m1-cmm 42 22 0.3333 0.2381 0.4545 1.6 7y7a-a1-m1-cMm_7y7a-a1-m1-cmm
14 7y7a-a1-m1-cMm 42 22 0.3333 0.2381 0.4545 1.6 7y7a-a1-m1-cMm_7y7a-a1-m1-cmm
15 6j3z-a1-m1-cm 42 22 0.3333 0.2381 0.4545 5.1 6j3z-a1-m1-cM_6j3z-a1-m1-cm
16 6j3z-a1-m1-cM 42 22 0.3333 0.2381 0.4545 5.1 6j3z-a1-m1-cM_6j3z-a1-m1-cm

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Reference:
Jacob Schwartz et al.

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