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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=56)
QVVRTKNVTLKPDVEEARLQELLGHDFFIYTDSEDGATNILYRREDGNLGLIEAKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3lyv-a4-m1-cB 56 56 1.0000 1.0000 1.0000 4.29e-36 3lyv-a4-m1-cB_3lyv-a4-m3-cA
2 3lyv-a4-m3-cA 57 56 1.0000 0.9825 1.0000 4.69e-36 3lyv-a4-m1-cB_3lyv-a4-m3-cA
3 6t7o-a1-m1-cA 59 56 0.5536 0.5254 0.5536 8.63e-16 6t7o-a1-m1-cB_6t7o-a1-m1-cA
4 6t7o-a1-m1-cB 58 55 0.5179 0.5000 0.5273 3.18e-15 6t7o-a1-m1-cB_6t7o-a1-m1-cA
5 6fxc-a1-m1-cBv 162 56 0.5536 0.1914 0.5536 1.64e-14 6fxc-a1-m1-cAv_6fxc-a1-m1-cBv
6 6fxc-a1-m1-cAv 162 56 0.5536 0.1914 0.5536 1.64e-14 6fxc-a1-m1-cAv_6fxc-a1-m1-cBv
7 6gzz-a1-m1-cX3 57 56 0.4821 0.4737 0.4821 5.39e-13 6gzz-a1-m1-cW4_6gzz-a1-m1-cX3
8 6gzz-a1-m1-cW4 57 56 0.4821 0.4737 0.4821 5.39e-13 6gzz-a1-m1-cW4_6gzz-a1-m1-cX3
9 6gzx-a1-m1-cX3 57 56 0.4821 0.4737 0.4821 5.39e-13 6gzx-a1-m1-cW4_6gzx-a1-m1-cX3
10 6gzx-a1-m1-cW4 57 56 0.4821 0.4737 0.4821 5.39e-13 6gzx-a1-m1-cW4_6gzx-a1-m1-cX3
11 3ka5-a1-m1-cB 57 56 0.4821 0.4737 0.4821 2.56e-11 3ka5-a1-m1-cA_3ka5-a1-m1-cB
12 3ka5-a1-m1-cA 55 54 0.4643 0.4727 0.4815 1.02e-10 3ka5-a1-m1-cA_3ka5-a1-m1-cB
13 5esc-a2-m1-cD 119 39 0.2143 0.1008 0.3077 6.4 5esc-a2-m1-cC_5esc-a2-m1-cD
14 5esc-a2-m1-cC 119 39 0.2143 0.1008 0.3077 6.4 5esc-a2-m1-cC_5esc-a2-m1-cD
15 4is5-a2-m2-cA 241 17 0.1429 0.0332 0.4706 7.4 4is5-a2-m2-cA_4is5-a2-m1-cA
16 4is5-a2-m1-cA 241 17 0.1429 0.0332 0.4706 7.4 4is5-a2-m2-cA_4is5-a2-m1-cA

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Reference:
Jacob Schwartz et al.

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