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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
QVYAPLVLRDPVSNPNNRKIDQDDDYELVRRNMHYQSQMLLDMAKIALENAKNADSPRHV
EVFAQLMGQMTTTNKEMLKMHKEMKDLAG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3txs-a1-m3-cB 90 89 1.0000 0.9889 1.0000 1.10e-62 3txs-a1-m3-cD_3txs-a1-m3-cB
2 3txs-a1-m3-cD 89 89 1.0000 1.0000 1.0000 1.16e-62 3txs-a1-m3-cD_3txs-a1-m3-cB
3 3txq-a1-m1-cK 87 87 0.9775 1.0000 1.0000 9.34e-61 3txq-a1-m1-cA_3txq-a1-m1-cK
4 3txq-a1-m1-cA 87 87 0.9775 1.0000 1.0000 9.34e-61 3txq-a1-m1-cA_3txq-a1-m1-cK
5 4uqv-a5-m1-cH 427 56 0.1348 0.0281 0.2143 6.4 4uqv-a5-m1-cH_4uqv-a5-m1-cG
6 4uqv-a5-m1-cG 429 56 0.1348 0.0280 0.2143 6.4 4uqv-a5-m1-cH_4uqv-a5-m1-cG
7 1lnw-a6-m2-cG 130 50 0.1910 0.1308 0.3400 7.1 1lnw-a6-m2-cG_1lnw-a6-m1-cA, 1lnw-a6-m2-cG_1lnw-a6-m2-cH
8 8fbj-a1-m3-cA 307 61 0.1461 0.0423 0.2131 7.8 8fbj-a1-m2-cA_8fbj-a1-m3-cA
9 8fbj-a1-m2-cA 307 61 0.1461 0.0423 0.2131 7.8 8fbj-a1-m2-cA_8fbj-a1-m3-cA
10 1fs1-a1-m1-cB 116 51 0.1461 0.1121 0.2549 9.5 1fs1-a1-m1-cB_1fs1-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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