Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=50)
QWSEEVERKLKEFVRRHQEITQETLHEYAQKLGLNQQAIEQFFREFEQRK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1y66-a1-m1-cA 50 50 1.0000 1.0000 1.0000 2.00e-29 1y66-a1-m1-cB_1y66-a1-m1-cA, 1y66-a1-m1-cD_1y66-a1-m1-cA
2 1y66-a1-m1-cD 46 46 0.9200 1.0000 1.0000 3.62e-26 1y66-a1-m1-cB_1y66-a1-m1-cD, 1y66-a1-m1-cD_1y66-a1-m1-cA
3 1y66-a1-m1-cB 46 46 0.9200 1.0000 1.0000 3.62e-26 1y66-a1-m1-cB_1y66-a1-m1-cA, 1y66-a1-m1-cB_1y66-a1-m1-cD
4 4c91-a1-m1-cB 809 35 0.2800 0.0173 0.4000 0.32 4c91-a1-m1-cB_4c91-a1-m1-cA
5 4c91-a1-m1-cA 811 35 0.2800 0.0173 0.4000 0.33 4c91-a1-m1-cB_4c91-a1-m1-cA
6 2mg4-a1-m1-cB 66 29 0.2600 0.1970 0.4483 0.45 2mg4-a1-m1-cA_2mg4-a1-m1-cB
7 2mg4-a1-m1-cA 66 29 0.2600 0.1970 0.4483 0.45 2mg4-a1-m1-cA_2mg4-a1-m1-cB
8 4zn8-a1-m1-cB 48 28 0.2600 0.2708 0.4643 0.56 4zn8-a1-m1-cB_4zn8-a1-m1-cA
9 4zn8-a1-m1-cA 50 28 0.2600 0.2600 0.4643 0.63 4zn8-a1-m1-cB_4zn8-a1-m1-cA, 4zn8-a1-m1-cD_4zn8-a1-m1-cA
10 4zn8-a1-m1-cD 45 24 0.2200 0.2444 0.4583 1.0 4zn8-a1-m1-cD_4zn8-a1-m1-cA
11 6p8v-a1-m1-cF 267 42 0.3000 0.0562 0.3571 1.2 6p8v-a1-m1-cF_6p8v-a1-m1-cA, 6p8v-a1-m1-cF_6p8v-a1-m1-cE
12 7my7-a2-m1-cDDD 259 22 0.2400 0.0463 0.5455 1.8 7my7-a2-m1-cCCC_7my7-a2-m1-cDDD
13 6p8v-a1-m1-cA 295 42 0.3000 0.0508 0.3571 2.4 6p8v-a1-m1-cF_6p8v-a1-m1-cA
14 6p8v-a1-m1-cC 299 42 0.3000 0.0502 0.3571 2.6 6p8v-a1-m1-cB_6p8v-a1-m1-cC
15 6p8v-a1-m1-cE 294 42 0.3000 0.0510 0.3571 2.7 6p8v-a1-m1-cF_6p8v-a1-m1-cE
16 6p8v-a1-m1-cB 298 42 0.3000 0.0503 0.3571 2.7 6p8v-a1-m1-cB_6p8v-a1-m1-cC
17 5uid-a2-m1-cD 358 15 0.1800 0.0251 0.6000 4.1 5uid-a2-m1-cD_5uid-a2-m1-cC
18 5uid-a2-m1-cC 359 15 0.1800 0.0251 0.6000 4.1 5uid-a2-m1-cD_5uid-a2-m1-cC
19 7f4y-a1-m1-cA 899 43 0.2800 0.0156 0.3256 5.9 7f4y-a1-m1-cA_7f4y-a1-m1-cB
20 7f4y-a1-m1-cB 901 43 0.2800 0.0155 0.3256 5.9 7f4y-a1-m1-cA_7f4y-a1-m1-cB
21 1rpe-a1-m1-cR 63 16 0.2000 0.1587 0.6250 6.0 1rpe-a1-m1-cL_1rpe-a1-m1-cR
22 1rpe-a1-m1-cL 63 16 0.2000 0.1587 0.6250 6.0 1rpe-a1-m1-cL_1rpe-a1-m1-cR

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600