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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=55)
QYKLILNGKTLKGVLTIEAVDAATAEKVFKQYANDLGVDGEWTYDDATKTFTVTE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3fil-a1-m1-cB 56 55 1.0000 0.9821 1.0000 3.84e-34 3fil-a1-m1-cA_3fil-a1-m1-cB
2 3fil-a1-m1-cA 55 55 1.0000 1.0000 1.0000 5.44e-34 3fil-a1-m1-cA_3fil-a1-m1-cB
3 6nla-a1-m2-cA 56 54 0.9273 0.9107 0.9444 5.01e-31 6nla-a1-m1-cA_6nla-a1-m2-cA
4 6nla-a1-m1-cA 56 54 0.9273 0.9107 0.9444 5.01e-31 6nla-a1-m1-cA_6nla-a1-m2-cA
5 2kwd-a1-m1-cE 56 55 0.9273 0.9107 0.9273 2.55e-30 2kwd-a1-m1-cA_2kwd-a1-m1-cE
6 2kwd-a1-m1-cC 56 55 0.9273 0.9107 0.9273 2.55e-30 2kwd-a1-m1-cA_2kwd-a1-m1-cC
7 2kwd-a1-m1-cA 56 55 0.9273 0.9107 0.9273 2.55e-30 2kwd-a1-m1-cA_2kwd-a1-m1-cC, 2kwd-a1-m1-cA_2kwd-a1-m1-cE
8 3mp9-a3-m2-cB 61 54 0.9091 0.8197 0.9259 1.21e-29 3mp9-a3-m1-cA_3mp9-a3-m2-cB
9 3mp9-a3-m1-cA 61 54 0.9091 0.8197 0.9259 1.21e-29 3mp9-a3-m1-cA_3mp9-a3-m2-cB
10 6f5n-a1-m1-cB 56 55 0.8545 0.8393 0.8545 1.18e-28 6f5n-a1-m1-cA_6f5n-a1-m1-cB
11 6f5n-a1-m1-cA 56 55 0.8545 0.8393 0.8545 1.18e-28 6f5n-a1-m1-cA_6f5n-a1-m1-cB
12 3v3x-a2-m1-cD 56 55 0.8909 0.8750 0.8909 3.31e-28 3v3x-a2-m1-cB_3v3x-a2-m1-cD
13 3v3x-a2-m1-cB 56 55 0.8909 0.8750 0.8909 3.31e-28 3v3x-a2-m1-cB_3v3x-a2-m1-cD
14 1q10-a1-m1-cB 56 55 0.8545 0.8393 0.8545 4.33e-27 1q10-a1-m1-cA_1q10-a1-m1-cB
15 1q10-a1-m1-cA 56 55 0.8545 0.8393 0.8545 4.33e-27 1q10-a1-m1-cA_1q10-a1-m1-cB
16 1mpe-a1-m1-cD 56 55 0.8364 0.8214 0.8364 4.39e-26 1mpe-a1-m1-cA_1mpe-a1-m1-cD, 1mpe-a1-m1-cB_1mpe-a1-m1-cD, 1mpe-a1-m1-cC_1mpe-a1-m1-cD
17 1mpe-a1-m1-cC 56 55 0.8364 0.8214 0.8364 4.39e-26 1mpe-a1-m1-cC_1mpe-a1-m1-cD
18 1mpe-a1-m1-cB 56 55 0.8364 0.8214 0.8364 4.39e-26 1mpe-a1-m1-cB_1mpe-a1-m1-cD
19 1mpe-a1-m1-cA 56 55 0.8364 0.8214 0.8364 4.39e-26 1mpe-a1-m1-cA_1mpe-a1-m1-cD
20 4jot-a1-m3-cA 249 24 0.2545 0.0562 0.5833 0.69 4jot-a1-m2-cA_4jot-a1-m3-cA
21 4jot-a1-m2-cA 249 24 0.2545 0.0562 0.5833 0.69 4jot-a1-m2-cA_4jot-a1-m3-cA
22 1cmx-a1-m1-cA 214 29 0.2000 0.0514 0.3793 3.4 1cmx-a1-m1-cC_1cmx-a1-m1-cA
23 1cmx-a1-m1-cC 210 29 0.2000 0.0524 0.3793 3.4 1cmx-a1-m1-cC_1cmx-a1-m1-cA
24 8duj-a1-m1-cA 3823 43 0.2909 0.0042 0.3721 4.8 8duj-a1-m1-cA_8duj-a1-m1-cG
25 3hhy-a1-m2-cA 256 17 0.1636 0.0352 0.5294 5.3 3hhy-a1-m1-cA_3hhy-a1-m2-cA
26 3hhy-a1-m1-cA 256 17 0.1636 0.0352 0.5294 5.3 3hhy-a1-m1-cA_3hhy-a1-m2-cA
27 4hyr-a2-m1-cA 428 37 0.2545 0.0327 0.3784 9.6 4hyr-a2-m1-cB_4hyr-a2-m1-cA
28 4hyr-a1-m1-cA 428 37 0.2545 0.0327 0.3784 9.6 4hyr-a1-m2-cB_4hyr-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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