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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
QYTIPGILHYIQHEWARFEMERAHWEVERAELQARIAFLQGERKGQENLKKDLVRRIKML
EYALKQERAKYHKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7k36-a1-m1-cD 74 74 1.0000 1.0000 1.0000 3.28e-49 7k36-a1-m1-cF_7k36-a1-m1-cD, 7k36-a1-m1-cG_7k36-a1-m1-cD
2 7k36-a1-m1-cE 66 66 0.8919 1.0000 1.0000 1.93e-43 7k36-a1-m1-cF_7k36-a1-m1-cE, 7k36-a1-m1-cG_7k36-a1-m1-cE
3 7k36-a1-m1-cF 62 62 0.8378 1.0000 1.0000 1.03e-40 7k36-a1-m1-cF_7k36-a1-m1-cD, 7k36-a1-m1-cF_7k36-a1-m1-cE, 7k36-a1-m1-cG_7k36-a1-m1-cF
4 7k36-a1-m1-cG 60 60 0.8108 1.0000 1.0000 3.77e-39 7k36-a1-m1-cG_7k36-a1-m1-cD, 7k36-a1-m1-cG_7k36-a1-m1-cE, 7k36-a1-m1-cG_7k36-a1-m1-cF
5 4n6j-a1-m1-cA 45 47 0.5405 0.8889 0.8511 9.58e-18 4n6j-a1-m1-cB_4n6j-a1-m1-cA
6 4n6j-a1-m1-cB 43 46 0.5405 0.9302 0.8696 1.74e-17 4n6j-a1-m1-cB_4n6j-a1-m1-cA
7 4c6f-a1-m2-cA 363 42 0.1486 0.0303 0.2619 0.14 4c6f-a1-m1-cA_4c6f-a1-m2-cA
8 4c6f-a1-m1-cA 363 42 0.1486 0.0303 0.2619 0.14 4c6f-a1-m1-cA_4c6f-a1-m2-cA
9 6hfj-a1-m2-cA 361 42 0.1486 0.0305 0.2619 0.15 6hfj-a1-m1-cA_6hfj-a1-m2-cA
10 6hfj-a1-m1-cA 361 42 0.1486 0.0305 0.2619 0.15 6hfj-a1-m1-cA_6hfj-a1-m2-cA
11 6t4r-a1-m1-cAAA 212 38 0.1892 0.0660 0.3684 1.3 6t4r-a1-m1-cCCC_6t4r-a1-m1-cAAA
12 6t4r-a1-m1-cCCC 210 38 0.1892 0.0667 0.3684 1.4 6t4r-a1-m1-cCCC_6t4r-a1-m1-cAAA
13 2raj-a1-m2-cA 382 24 0.1081 0.0209 0.3333 8.4 2raj-a1-m1-cA_2raj-a1-m2-cA
14 2raj-a1-m1-cA 382 24 0.1081 0.0209 0.3333 8.4 2raj-a1-m1-cA_2raj-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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