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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
RALHRRVNYPSRAKALGVEGKVRVKFDITGSGTVTNVQVLSETPDGVFGDDVVKDMARWR
YRTEAPVENQVVSIVFKLNGHIRVDDQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7zc8-a1-m1-cA 87 87 1.0000 1.0000 1.0000 4.92e-60 7zc8-a1-m1-cB_7zc8-a1-m1-cA
2 7zc8-a1-m1-cB 86 86 0.9885 1.0000 1.0000 2.40e-59 7zc8-a1-m1-cB_7zc8-a1-m1-cA
3 1u07-a1-m1-cA 90 86 0.4713 0.4556 0.4767 1.96e-21 1u07-a1-m1-cB_1u07-a1-m1-cA
4 1u07-a1-m1-cB 88 86 0.4713 0.4659 0.4767 2.24e-21 1u07-a1-m1-cB_1u07-a1-m1-cA
5 1ihr-a1-m1-cB 74 74 0.4023 0.4730 0.4730 3.99e-18 1ihr-a1-m1-cA_1ihr-a1-m1-cB
6 1ihr-a1-m1-cA 73 70 0.4023 0.4795 0.5000 4.15e-18 1ihr-a1-m1-cA_1ihr-a1-m1-cB
7 4zi5-a1-m1-cB 239 79 0.2529 0.0921 0.2785 0.60 4zi5-a1-m1-cA_4zi5-a1-m1-cB
8 4zi5-a1-m1-cA 239 79 0.2529 0.0921 0.2785 0.60 4zi5-a1-m1-cA_4zi5-a1-m1-cB
9 5yax-a1-m1-cB 230 44 0.1724 0.0652 0.3409 2.2 5yax-a1-m1-cA_5yax-a1-m1-cB
10 5yax-a1-m1-cA 228 44 0.1724 0.0658 0.3409 2.3 5yax-a1-m1-cA_5yax-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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