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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=50)
RDLEAAYNNLLRDKSALEEEKRQLEQENEDLARRLESSSEEVTRLRRGQC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5vr2-a2-m1-cD 50 50 1.0000 1.0000 1.0000 3.22e-28 5vr2-a2-m1-cC_5vr2-a2-m1-cD
2 5vr2-a2-m1-cC 50 50 1.0000 1.0000 1.0000 3.22e-28 5vr2-a2-m1-cC_5vr2-a2-m1-cD
3 5b3d-a6-m1-cD 107 28 0.2400 0.1121 0.4286 0.45 5b3d-a6-m1-cD_5b3d-a6-m1-cC
4 3lke-a1-m1-cB 251 28 0.3200 0.0637 0.5714 1.0 3lke-a1-m1-cB_3lke-a1-m1-cC
5 3lke-a1-m1-cC 252 28 0.3200 0.0635 0.5714 1.0 3lke-a1-m1-cB_3lke-a1-m1-cC
6 2yny-a1-m1-cC 105 43 0.2200 0.1048 0.2558 1.1 2yny-a1-m1-cB_2yny-a1-m1-cC
7 2yny-a1-m1-cB 104 43 0.2200 0.1058 0.2558 1.1 2yny-a1-m1-cB_2yny-a1-m1-cC
8 7vuq-a1-m1-cB 296 35 0.2600 0.0439 0.3714 5.8 7vuq-a1-m1-cA_7vuq-a1-m1-cB
9 7vuq-a1-m1-cA 296 35 0.2600 0.0439 0.3714 5.8 7vuq-a1-m1-cA_7vuq-a1-m1-cB
10 3ng7-a1-m2-cX 427 29 0.2600 0.0304 0.4483 9.5 3ng7-a1-m1-cX_3ng7-a1-m2-cX
11 3ng7-a1-m1-cX 427 29 0.2600 0.0304 0.4483 9.5 3ng7-a1-m1-cX_3ng7-a1-m2-cX

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Reference:
Jacob Schwartz et al.

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