Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
RDNIQGITKPAIRRLARRGGVKRISGLIYEEVRNVLKTFLESVIRDAVTYTEHAKRKTVT
SLDVVYALKRQG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2yfw-a2-m1-cF 72 72 1.0000 1.0000 1.0000 6.20e-47 2yfw-a2-m1-cD_2yfw-a2-m1-cF
2 2yfw-a2-m1-cD 71 71 0.9861 1.0000 1.0000 2.74e-46 2yfw-a2-m1-cD_2yfw-a2-m1-cF
3 7x58-a1-m1-cH 73 72 0.9167 0.9041 0.9167 4.66e-43 7x58-a1-m1-cB_7x58-a1-m1-cH
4 7x58-a1-m1-cB 73 72 0.9167 0.9041 0.9167 4.66e-43 7x58-a1-m1-cB_7x58-a1-m1-cH
5 1ku5-a1-m1-cB 66 62 0.3056 0.3333 0.3548 6.52e-04 1ku5-a1-m1-cA_1ku5-a1-m1-cB
6 1ku5-a1-m1-cA 66 62 0.3056 0.3333 0.3548 6.52e-04 1ku5-a1-m1-cA_1ku5-a1-m1-cB
7 1b67-a1-m1-cA 68 58 0.2500 0.2647 0.3103 0.024 1b67-a1-m1-cB_1b67-a1-m1-cA
8 1b67-a1-m1-cB 65 58 0.2500 0.2769 0.3103 0.026 1b67-a1-m1-cB_1b67-a1-m1-cA
9 5t5k-a1-m1-cF 67 63 0.2778 0.2985 0.3175 0.056 5t5k-a1-m1-cD_5t5k-a1-m1-cF, 5t5k-a1-m1-cE_5t5k-a1-m1-cF
10 5t5k-a1-m1-cE 67 63 0.2778 0.2985 0.3175 0.056 5t5k-a1-m1-cE_5t5k-a1-m1-cF
11 5t5k-a1-m1-cD 67 63 0.2778 0.2985 0.3175 0.056 5t5k-a1-m1-cD_5t5k-a1-m1-cF
12 7da0-a1-m2-cB 95 24 0.1667 0.1263 0.5000 0.68 7da0-a1-m1-cB_7da0-a1-m2-cB
13 7da0-a1-m1-cB 95 24 0.1667 0.1263 0.5000 0.68 7da0-a1-m1-cB_7da0-a1-m2-cB
14 2i5p-a1-m1-cP 309 34 0.1667 0.0388 0.3529 0.92 2i5p-a1-m1-cP_2i5p-a1-m1-cO
15 2i5p-a1-m1-cO 309 34 0.1667 0.0388 0.3529 0.92 2i5p-a1-m1-cP_2i5p-a1-m1-cO
16 1f1e-a1-m2-cA 147 57 0.2222 0.1088 0.2807 2.1 1f1e-a1-m1-cA_1f1e-a1-m2-cA
17 1f1e-a1-m1-cA 147 57 0.2222 0.1088 0.2807 2.1 1f1e-a1-m1-cA_1f1e-a1-m2-cA
18 1taf-a2-m5-cA 68 26 0.1389 0.1471 0.3846 3.3 1taf-a2-m4-cA_1taf-a2-m5-cA
19 1taf-a2-m4-cA 68 26 0.1389 0.1471 0.3846 3.3 1taf-a2-m4-cA_1taf-a2-m5-cA
20 3p2c-a1-m1-cB 431 36 0.2083 0.0348 0.4167 5.9 3p2c-a1-m1-cA_3p2c-a1-m1-cB
21 3p2c-a1-m1-cA 431 36 0.2083 0.0348 0.4167 5.9 3p2c-a1-m1-cA_3p2c-a1-m1-cB
22 2xzp-a1-m3-cA 621 16 0.1528 0.0177 0.6875 8.1 2xzp-a1-m2-cA_2xzp-a1-m3-cA
23 2xzp-a1-m2-cA 621 16 0.1528 0.0177 0.6875 8.1 2xzp-a1-m2-cA_2xzp-a1-m3-cA
24 7d69-a1-m1-cA 90 45 0.1806 0.1444 0.2889 9.0 7d69-a1-m1-cA_7d69-a1-m1-cE
25 7d69-a1-m1-cE 99 45 0.1806 0.1313 0.2889 9.5 7d69-a1-m1-cA_7d69-a1-m1-cE

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600