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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
REDMEKRANEVANLLKTLSHPVRLLVCTLVEGEFSVGELEQQIGIGQPTLSQQLGVLRES
GIVETRRNIKQIFYRLTEAKAAQLVNALYTIFCAQEKQA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3pqk-a3-m1-cE 100 99 1.0000 0.9900 1.0000 1.25e-68 3pqk-a3-m1-cF_3pqk-a3-m1-cE
2 3pqk-a3-m1-cF 99 99 1.0000 1.0000 1.0000 1.38e-68 3pqk-a3-m1-cF_3pqk-a3-m1-cE
3 6o8l-a1-m2-cA 92 89 0.4040 0.4348 0.4494 4.14e-20 6o8l-a1-m1-cA_6o8l-a1-m2-cA
4 6o8l-a1-m1-cA 92 89 0.4040 0.4348 0.4494 4.14e-20 6o8l-a1-m1-cA_6o8l-a1-m2-cA
5 4ooi-a1-m1-cB 96 93 0.3232 0.3333 0.3441 7.68e-17 4ooi-a1-m1-cA_4ooi-a1-m1-cB
6 4ooi-a1-m1-cA 95 93 0.3232 0.3368 0.3441 7.90e-17 4ooi-a1-m1-cA_4ooi-a1-m1-cB
7 4omz-a2-m1-cC 100 85 0.3030 0.3000 0.3529 8.91e-13 4omz-a2-m1-cD_4omz-a2-m1-cC
8 6jmi-a1-m1-cA 100 76 0.3232 0.3200 0.4211 2.21e-12 6jmi-a1-m1-cD_6jmi-a1-m1-cA
9 4omz-a2-m1-cD 98 83 0.2929 0.2959 0.3494 2.57e-12 4omz-a2-m1-cD_4omz-a2-m1-cC
10 3cuo-a2-m1-cC 95 91 0.2626 0.2737 0.2857 1.72e-11 3cuo-a2-m1-cD_3cuo-a2-m1-cC
11 3cuo-a2-m1-cD 94 75 0.2525 0.2660 0.3333 3.77e-11 3cuo-a2-m1-cD_3cuo-a2-m1-cC
12 7p6f-a3-m3-cDDD 97 90 0.2828 0.2887 0.3111 7.98e-11 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
13 7p6f-a3-m1-cDDD 97 90 0.2828 0.2887 0.3111 7.98e-11 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
14 3jth-a1-m1-cB 88 69 0.2828 0.3182 0.4058 9.69e-10 3jth-a1-m1-cB_3jth-a1-m1-cA
15 3jth-a1-m1-cA 92 69 0.2828 0.3043 0.4058 9.93e-10 3jth-a1-m1-cB_3jth-a1-m1-cA
16 2lkp-a1-m1-cB 119 84 0.3333 0.2773 0.3929 1.26e-09 2lkp-a1-m1-cA_2lkp-a1-m1-cB
17 2lkp-a1-m1-cA 119 84 0.3333 0.2773 0.3929 1.26e-09 2lkp-a1-m1-cA_2lkp-a1-m1-cB
18 6jmi-a1-m1-cD 83 53 0.2727 0.3253 0.5094 1.88e-07 6jmi-a1-m1-cD_6jmi-a1-m1-cA
19 3f6v-a1-m2-cA 96 74 0.2727 0.2812 0.3649 8.26e-06 3f6v-a1-m1-cA_3f6v-a1-m2-cA
20 3f6v-a1-m1-cA 96 74 0.2727 0.2812 0.3649 8.26e-06 3f6v-a1-m1-cA_3f6v-a1-m2-cA
21 6j0e-a1-m1-cB 125 81 0.2525 0.2000 0.3086 4.08e-05 6j0e-a1-m1-cA_6j0e-a1-m1-cB
22 6j0e-a1-m1-cA 124 85 0.2525 0.2016 0.2941 4.11e-05 6j0e-a1-m1-cA_6j0e-a1-m1-cB
23 1r23-a1-m1-cB 97 57 0.2020 0.2062 0.3509 2.93e-04 1r23-a1-m1-cB_1r23-a1-m1-cA
24 1r23-a1-m1-cA 104 46 0.1616 0.1538 0.3478 3.04e-04 1r23-a1-m1-cB_1r23-a1-m1-cA
25 2jsc-a1-m1-cB 97 89 0.2222 0.2268 0.2472 0.002 2jsc-a1-m1-cA_2jsc-a1-m1-cB
26 2jsc-a1-m1-cA 96 89 0.2222 0.2292 0.2472 0.002 2jsc-a1-m1-cA_2jsc-a1-m1-cB
27 7txn-a1-m1-cB 105 74 0.2323 0.2190 0.3108 0.003 7txn-a1-m1-cA_7txn-a1-m1-cB
28 7txn-a1-m1-cA 104 74 0.2323 0.2212 0.3108 0.003 7txn-a1-m1-cA_7txn-a1-m1-cB
29 2p4w-a1-m1-cA 197 60 0.1818 0.0914 0.3000 0.007 2p4w-a1-m1-cA_2p4w-a1-m1-cB
30 2p4w-a1-m1-cB 198 60 0.1818 0.0909 0.3000 0.007 2p4w-a1-m1-cA_2p4w-a1-m1-cB
31 4fx0-a1-m1-cB 135 50 0.1818 0.1333 0.3600 0.030 4fx0-a1-m1-cA_4fx0-a1-m1-cB
32 3gw2-a1-m2-cA 92 77 0.2424 0.2609 0.3117 0.039 3gw2-a1-m1-cA_3gw2-a1-m2-cA
33 3gw2-a1-m1-cA 92 77 0.2424 0.2609 0.3117 0.039 3gw2-a1-m1-cA_3gw2-a1-m2-cA
34 3clv-a1-m2-cA 175 72 0.2424 0.1371 0.3333 0.17 3clv-a1-m1-cA_3clv-a1-m2-cA
35 3clv-a1-m1-cA 175 72 0.2424 0.1371 0.3333 0.17 3clv-a1-m1-cA_3clv-a1-m2-cA
36 7l19-a2-m1-cC 129 43 0.1414 0.1085 0.3256 0.34 7l19-a2-m1-cB_7l19-a2-m1-cC
37 4cic-a1-m1-cB 137 38 0.1313 0.0949 0.3421 0.35 4cic-a1-m1-cB_4cic-a1-m1-cA
38 4cic-a1-m1-cA 138 38 0.1313 0.0942 0.3421 0.36 4cic-a1-m1-cB_4cic-a1-m1-cA
39 6uvu-a1-m1-cA 111 73 0.2222 0.1982 0.3014 0.48 6uvu-a1-m1-cA_6uvu-a1-m1-cB
40 7bhy-a2-m2-cC 55 36 0.1111 0.2000 0.3056 0.49 7bhy-a2-m1-cC_7bhy-a2-m2-cC
41 7bhy-a2-m1-cC 55 36 0.1111 0.2000 0.3056 0.49 7bhy-a2-m1-cC_7bhy-a2-m2-cC
42 6uvu-a1-m1-cB 114 73 0.2222 0.1930 0.3014 0.50 6uvu-a1-m1-cA_6uvu-a1-m1-cB
43 8f8u-a1-m1-cA 297 46 0.1515 0.0505 0.3261 0.56 8f8u-a1-m1-cB_8f8u-a1-m1-cA
44 8f8u-a1-m1-cB 296 46 0.1515 0.0507 0.3261 0.60 8f8u-a1-m1-cB_8f8u-a1-m1-cA
45 2oqg-a1-m1-cD 105 67 0.1717 0.1619 0.2537 1.1 2oqg-a1-m1-cC_2oqg-a1-m1-cD, 2oqg-a1-m1-cD_2oqg-a1-m1-cA, 2oqg-a1-m1-cD_2oqg-a1-m1-cB
46 2oqg-a1-m1-cC 105 67 0.1717 0.1619 0.2537 1.1 2oqg-a1-m1-cC_2oqg-a1-m1-cD
47 2oqg-a1-m1-cB 107 67 0.1717 0.1589 0.2537 1.2 2oqg-a1-m1-cA_2oqg-a1-m1-cB, 2oqg-a1-m1-cD_2oqg-a1-m1-cB
48 2oqg-a1-m1-cA 107 67 0.1717 0.1589 0.2537 1.3 2oqg-a1-m1-cA_2oqg-a1-m1-cB, 2oqg-a1-m1-cD_2oqg-a1-m1-cA
49 4fx0-a1-m1-cA 122 36 0.1313 0.1066 0.3611 1.6 4fx0-a1-m1-cA_4fx0-a1-m1-cB
50 4kxf-a11-m5-cD 899 91 0.2222 0.0245 0.2418 2.8 4kxf-a11-m1-cD_4kxf-a11-m5-cD, 4kxf-a11-m5-cN_4kxf-a11-m5-cD
51 4kxf-a11-m1-cD 899 91 0.2222 0.0245 0.2418 2.8 4kxf-a11-m1-cD_4kxf-a11-m5-cD, 4kxf-a11-m5-cN_4kxf-a11-m1-cD
52 3jbl-a1-m1-cK 908 91 0.2222 0.0242 0.2418 2.8 3jbl-a1-m1-cJ_3jbl-a1-m1-cK
53 3jbl-a1-m1-cJ 908 91 0.2222 0.0242 0.2418 2.8 3jbl-a1-m1-cJ_3jbl-a1-m1-cK
54 4kxf-a11-m5-cN 881 91 0.2222 0.0250 0.2418 2.9 4kxf-a11-m5-cN_4kxf-a11-m1-cD, 4kxf-a11-m5-cN_4kxf-a11-m5-cD
55 4aik-a1-m1-cB 142 47 0.1717 0.1197 0.3617 6.3 4aik-a1-m1-cA_4aik-a1-m1-cB
56 4aik-a1-m1-cA 139 47 0.1717 0.1223 0.3617 6.8 4aik-a1-m1-cA_4aik-a1-m1-cB
57 2f2e-a3-m3-cA 140 53 0.1616 0.1143 0.3019 8.8 2f2e-a3-m3-cB_2f2e-a3-m3-cA
58 2f2e-a3-m3-cB 138 53 0.1616 0.1159 0.3019 9.1 2f2e-a3-m1-cB_2f2e-a3-m3-cB, 2f2e-a3-m3-cB_2f2e-a3-m3-cA
59 2f2e-a3-m1-cB 138 53 0.1616 0.1159 0.3019 9.1 2f2e-a3-m1-cB_2f2e-a3-m3-cB
60 2f2e-a2-m2-cB 138 53 0.1616 0.1159 0.3019 9.1 2f2e-a2-m1-cB_2f2e-a2-m2-cB
61 2f2e-a2-m1-cB 138 53 0.1616 0.1159 0.3019 9.1 2f2e-a2-m1-cB_2f2e-a2-m2-cB

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Reference:
Jacob Schwartz et al.

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