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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
REEIEEAVKEAELKVLAIVLVALRSVSHYEPLSRLYESFLDALKKALSEEELKEVEKEAE
RIEKK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8d07-a2-m1-cC 65 65 1.0000 1.0000 1.0000 3.37e-36 8d07-a2-m1-cB_8d07-a2-m1-cC
2 8d07-a2-m1-cB 65 65 1.0000 1.0000 1.0000 3.37e-36 8d07-a2-m1-cB_8d07-a2-m1-cC
3 3val-a1-m1-cA 174 33 0.1385 0.0517 0.2727 3.3 3val-a1-m1-cI_3val-a1-m1-cA
4 3vai-a1-m1-cB 174 33 0.1385 0.0517 0.2727 3.3 3vai-a1-m1-cA_3vai-a1-m1-cB
5 3vai-a1-m1-cA 174 33 0.1385 0.0517 0.2727 3.3 3vai-a1-m1-cA_3vai-a1-m1-cB
6 3val-a1-m1-cI 172 33 0.1385 0.0523 0.2727 3.4 3val-a1-m1-cI_3val-a1-m1-cA
7 2g4b-a1-m2-cA 172 33 0.1385 0.0523 0.2727 3.4 2g4b-a1-m1-cA_2g4b-a1-m2-cA
8 2g4b-a1-m1-cA 172 33 0.1385 0.0523 0.2727 3.4 2g4b-a1-m1-cA_2g4b-a1-m2-cA
9 8atu-a1-m1-cB 2837 38 0.2000 0.0046 0.3421 3.9 8atu-a1-m1-cA_8atu-a1-m1-cB
10 8atu-a1-m1-cA 2837 38 0.2000 0.0046 0.3421 3.9 8atu-a1-m1-cA_8atu-a1-m1-cB
11 3fvt-a2-m1-cN 318 38 0.2154 0.0440 0.3684 8.8 3fvt-a2-m1-cH_3fvt-a2-m1-cN, 3fvt-a2-m1-cI_3fvt-a2-m1-cN, 3fvt-a2-m1-cM_3fvt-a2-m1-cN
12 3fvt-a2-m1-cM 318 38 0.2154 0.0440 0.3684 8.8 3fvt-a2-m1-cM_3fvt-a2-m1-cN
13 3fvt-a2-m1-cI 317 38 0.2154 0.0442 0.3684 9.1 3fvt-a2-m1-cI_3fvt-a2-m1-cN
14 3fvt-a2-m1-cH 317 38 0.2154 0.0442 0.3684 9.1 3fvt-a2-m1-cH_3fvt-a2-m1-cN

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Reference:
Jacob Schwartz et al.

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