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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
REKEKARELRRSQWWKNRIARGICHYCGEIFPPEELTDHLVPVVRGGKSTRGNVVPACKE
CNNRKKYLLPVEWEEYLDSL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4h9d-a1-m1-cA 95 80 1.0000 0.8421 1.0000 6.39e-56 4h9d-a1-m1-cB_4h9d-a1-m1-cA
2 4h9d-a1-m1-cB 89 80 1.0000 0.8989 1.0000 7.24e-56 4h9d-a1-m1-cB_4h9d-a1-m1-cA, 4h9d-a1-m1-cC_4h9d-a1-m1-cB
3 4h9d-a1-m1-cC 80 80 1.0000 1.0000 1.0000 1.75e-55 4h9d-a1-m1-cC_4h9d-a1-m1-cB
4 6ghc-a1-m1-cA 283 62 0.2250 0.0636 0.2903 0.006 6ghc-a1-m1-cA_6ghc-a1-m1-cB
5 6ghc-a1-m1-cB 286 62 0.2250 0.0629 0.2903 0.006 6ghc-a1-m1-cA_6ghc-a1-m1-cB
6 3exi-a1-m2-cA 332 58 0.2625 0.0633 0.3621 0.17 3exi-a1-m1-cA_3exi-a1-m2-cA
7 3exi-a1-m1-cA 332 58 0.2625 0.0633 0.3621 0.17 3exi-a1-m1-cA_3exi-a1-m2-cA
8 3exg-a1-m1-cC 342 58 0.2625 0.0614 0.3621 0.31 3exg-a1-m1-cA_3exg-a1-m1-cC
9 3exg-a1-m1-cA 342 58 0.2625 0.0614 0.3621 0.31 3exg-a1-m1-cA_3exg-a1-m1-cC
10 5t67-a1-m1-cA 405 24 0.1375 0.0272 0.4583 2.4 5t67-a1-m1-cB_5t67-a1-m1-cA
11 5t67-a1-m1-cB 402 24 0.1375 0.0274 0.4583 2.6 5t67-a1-m1-cB_5t67-a1-m1-cA
12 5fvm-a1-m1-cB 2117 16 0.1000 0.0038 0.5000 5.0 5fvm-a1-m1-cA_5fvm-a1-m1-cB
13 5fvm-a1-m1-cA 2117 16 0.1000 0.0038 0.5000 5.0 5fvm-a1-m1-cA_5fvm-a1-m1-cB
14 3h87-a1-m2-cB 138 16 0.1000 0.0580 0.5000 6.5 3h87-a1-m2-cA_3h87-a1-m2-cB
15 3h87-a1-m2-cA 136 16 0.1000 0.0588 0.5000 6.6 3h87-a1-m2-cA_3h87-a1-m2-cB
16 8gxl-a1-m1-cA 119 29 0.1000 0.0672 0.2759 7.4 8gxl-a1-m1-cA_8gxl-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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