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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=73)
RENLYFQGRVSYNKLWKLLIDRDKKGELREAVGVSKSTFAKLGKNENVSLTVLLAICEYL
NCDFGDIIEALPE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3tys-a1-m2-cA 73 73 1.0000 1.0000 1.0000 4.30e-49 3tys-a1-m1-cA_3tys-a1-m2-cA
2 3tys-a1-m1-cA 73 73 1.0000 1.0000 1.0000 4.30e-49 3tys-a1-m1-cA_3tys-a1-m2-cA
3 2o9x-a2-m2-cA 160 42 0.2466 0.1125 0.4286 0.034 2o9x-a2-m1-cA_2o9x-a2-m2-cA
4 2o9x-a2-m1-cA 160 42 0.2466 0.1125 0.4286 0.034 2o9x-a2-m1-cA_2o9x-a2-m2-cA
5 5jm0-a1-m4-cA 940 25 0.2055 0.0160 0.6000 0.63 5jm0-a1-m1-cA_5jm0-a1-m4-cA, 5jm0-a1-m2-cA_5jm0-a1-m4-cA, 5jm0-a1-m3-cA_5jm0-a1-m4-cA
6 5jm0-a1-m3-cA 940 25 0.2055 0.0160 0.6000 0.63 5jm0-a1-m3-cA_5jm0-a1-m4-cA
7 5jm0-a1-m2-cA 940 25 0.2055 0.0160 0.6000 0.63 5jm0-a1-m2-cA_5jm0-a1-m4-cA
8 5jm0-a1-m1-cA 940 25 0.2055 0.0160 0.6000 0.63 5jm0-a1-m1-cA_5jm0-a1-m4-cA
9 7dl3-a1-m1-cA 354 43 0.2192 0.0452 0.3721 0.71 7dl3-a1-m1-cC_7dl3-a1-m1-cA
10 7dl3-a1-m1-cC 351 43 0.2192 0.0456 0.3721 0.79 7dl3-a1-m1-cC_7dl3-a1-m1-cA
11 3dz8-a1-m2-cA 178 20 0.1781 0.0730 0.6500 1.5 3dz8-a1-m1-cA_3dz8-a1-m2-cA
12 3dz8-a1-m1-cA 178 20 0.1781 0.0730 0.6500 1.5 3dz8-a1-m1-cA_3dz8-a1-m2-cA
13 2iai-a1-m2-cA 196 48 0.2329 0.0867 0.3542 2.9 2iai-a1-m1-cA_2iai-a1-m2-cA
14 2iai-a1-m1-cA 196 48 0.2329 0.0867 0.3542 2.9 2iai-a1-m1-cA_2iai-a1-m2-cA
15 1zs4-a1-m1-cD 73 30 0.1507 0.1507 0.3667 3.6 1zs4-a1-m1-cD_1zs4-a1-m1-cA
16 1xwr-a1-m1-cC 76 30 0.1507 0.1447 0.3667 4.3 1xwr-a1-m1-cC_1xwr-a1-m1-cA, 1xwr-a1-m1-cC_1xwr-a1-m1-cD
17 1zs4-a1-m1-cC 79 30 0.1507 0.1392 0.3667 4.6 1zs4-a1-m1-cC_1zs4-a1-m1-cA, 1zs4-a1-m1-cC_1zs4-a1-m1-cB
18 1xwr-a1-m1-cA 79 30 0.1507 0.1392 0.3667 4.6 1xwr-a1-m1-cB_1xwr-a1-m1-cA, 1xwr-a1-m1-cC_1xwr-a1-m1-cA, 1xwr-a1-m1-cD_1xwr-a1-m1-cA
19 1xwr-a1-m1-cD 77 30 0.1507 0.1429 0.3667 4.7 1xwr-a1-m1-cB_1xwr-a1-m1-cD, 1xwr-a1-m1-cC_1xwr-a1-m1-cD, 1xwr-a1-m1-cD_1xwr-a1-m1-cA
20 1xwr-a1-m1-cB 77 30 0.1507 0.1429 0.3667 4.7 1xwr-a1-m1-cB_1xwr-a1-m1-cA, 1xwr-a1-m1-cB_1xwr-a1-m1-cD
21 1zs4-a1-m1-cB 82 30 0.1507 0.1341 0.3667 5.1 1zs4-a1-m1-cC_1zs4-a1-m1-cB
22 1zs4-a1-m1-cA 82 30 0.1507 0.1341 0.3667 5.1 1zs4-a1-m1-cC_1zs4-a1-m1-cA, 1zs4-a1-m1-cD_1zs4-a1-m1-cA
23 3d3r-a2-m2-cA 80 70 0.2466 0.2250 0.2571 5.3 3d3r-a2-m2-cB_3d3r-a2-m2-cA
24 3d3r-a2-m1-cA 80 70 0.2466 0.2250 0.2571 5.3 3d3r-a2-m2-cB_3d3r-a2-m1-cA
25 5ean-a1-m2-cA 1051 55 0.2466 0.0171 0.3273 6.0 5ean-a1-m1-cA_5ean-a1-m2-cA
26 5ean-a1-m1-cA 1051 55 0.2466 0.0171 0.3273 6.0 5ean-a1-m1-cA_5ean-a1-m2-cA
27 1lk5-a1-m1-cD 229 26 0.1781 0.0568 0.5000 7.3 1lk5-a1-m1-cB_1lk5-a1-m1-cD
28 1lk5-a1-m1-cC 229 26 0.1781 0.0568 0.5000 7.3 1lk5-a1-m1-cB_1lk5-a1-m1-cC
29 1lk5-a1-m1-cB 229 26 0.1781 0.0568 0.5000 7.3 1lk5-a1-m1-cA_1lk5-a1-m1-cB, 1lk5-a1-m1-cB_1lk5-a1-m1-cC, 1lk5-a1-m1-cB_1lk5-a1-m1-cD
30 1lk5-a1-m1-cA 229 26 0.1781 0.0568 0.5000 7.3 1lk5-a1-m1-cA_1lk5-a1-m1-cB
31 3fkj-a1-m1-cA 330 20 0.1233 0.0273 0.4500 9.2 3fkj-a1-m1-cB_3fkj-a1-m1-cA
32 6xig-a1-m1-cA 379 49 0.2192 0.0422 0.3265 9.2 6xig-a1-m1-cA_6xig-a1-m1-cB
33 6xig-a1-m1-cB 383 49 0.2192 0.0418 0.3265 9.9 6xig-a1-m1-cA_6xig-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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