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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=35)
REPEERHLDDAFFRGYKNLEPEAKAQLRKILDTFK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7t5w-a1-m1-cA 35 35 1.0000 1.0000 1.0000 6.62e-20 7t5w-a1-m1-cA_7t5w-a1-m1-cD
2 7t5w-a1-m1-cD 37 35 1.0000 0.9459 1.0000 6.69e-20 7t5w-a1-m1-cA_7t5w-a1-m1-cD
3 7t5v-a1-m2-cA 34 31 0.8571 0.8824 0.9677 1.96e-16 7t5v-a1-m1-cA_7t5v-a1-m2-cA
4 7t5v-a1-m1-cA 34 31 0.8571 0.8824 0.9677 1.96e-16 7t5v-a1-m1-cA_7t5v-a1-m2-cA
5 3f6v-a1-m2-cA 96 25 0.3429 0.1250 0.4800 0.96 3f6v-a1-m1-cA_3f6v-a1-m2-cA
6 3f6v-a1-m1-cA 96 25 0.3429 0.1250 0.4800 0.96 3f6v-a1-m1-cA_3f6v-a1-m2-cA
7 1qki-a1-m1-cB 489 33 0.4286 0.0307 0.4545 7.3 1qki-a1-m1-cB_1qki-a1-m1-cD
8 1qki-a1-m1-cD 490 33 0.4286 0.0306 0.4545 7.3 1qki-a1-m1-cB_1qki-a1-m1-cD
9 6e07-a3-m1-cN 486 33 0.4286 0.0309 0.4545 7.4 6e07-a3-m1-cB_6e07-a3-m1-cN
10 5ukw-a1-m4-cA 476 33 0.4286 0.0315 0.4545 7.6 5ukw-a1-m1-cA_5ukw-a1-m4-cA
11 5ukw-a1-m1-cA 476 33 0.4286 0.0315 0.4545 7.6 5ukw-a1-m1-cA_5ukw-a1-m4-cA
12 6e07-a3-m1-cB 485 33 0.4286 0.0309 0.4545 7.6 6e07-a3-m1-cB_6e07-a3-m1-cN
13 3h8l-a1-m1-cB 356 21 0.2571 0.0253 0.4286 8.4 3h8l-a1-m1-cA_3h8l-a1-m1-cB
14 3h8l-a1-m1-cA 356 21 0.2571 0.0253 0.4286 8.4 3h8l-a1-m1-cA_3h8l-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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